Gene : Seita.9G271700 S. italica v2.2
Defline:  (1 of 2) PTHR18866:SF106 - ACETYL-COA CARBOXYLASE 1 Genomic Order:  2717
Name:  ? Seita.9G271700 Secondary Identifier:  ? PAC:32689073
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY0-1264 Setaria italica pathologic  
Sitalica PWY-4381 Setaria italica pathologic  
Sitalica PWY-5156 Setaria italica pathologic  
Sitalica PWY-7388 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G271700 0.5kb upstream 0.5kb upstream 12737 true scaffold_9: 23428600-23441336 Setaria italica
Seita.9G271700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 23440837-23441336 Setaria italica
Seita.9G271700 0.5kb downstream 0.5kb downstream 12737 true scaffold_9: 23428100-23440836 Setaria italica
Seita.9G271700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 23428100-23428599 Setaria italica
Seita.9G271700 1.0kb upstream 1.0kb upstream 13237 true scaffold_9: 23428600-23441836 Setaria italica
Seita.9G271700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 23440837-23441836 Setaria italica
Seita.9G271700 1.0kb downstream 1.0kb downstream 13237 true scaffold_9: 23427600-23440836 Setaria italica
Seita.9G271700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 23427600-23428599 Setaria italica
Seita.9G271700 2.0kb upstream 2.0kb upstream 14237 true scaffold_9: 23428600-23442836 Setaria italica
Seita.9G271700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 23440837-23442836 Setaria italica
Seita.9G271700 2.0kb downstream 2.0kb downstream 14237 true scaffold_9: 23426600-23440836 Setaria italica
Seita.9G271700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 23426600-23428599 Setaria italica
Seita.9G271700 5.0kb upstream 5.0kb upstream 17237 true scaffold_9: 23428600-23445836 Setaria italica
Seita.9G271700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 23440837-23445836 Setaria italica
Seita.9G271700 5.0kb downstream 5.0kb downstream 17237 true scaffold_9: 23423600-23440836 Setaria italica
Seita.9G271700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 23423600-23428599 Setaria italica
Seita.9G271700 10.0kb upstream 10.0kb upstream 22237 true scaffold_9: 23428600-23450836 Setaria italica
Seita.9G271700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 23440837-23450836 Setaria italica
Seita.9G271700 10.0kb downstream 10.0kb downstream 22237 true scaffold_9: 23418600-23440836 Setaria italica
Seita.9G271700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 23418600-23428599 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041353 5273 Angiosperm View MSA
122180513 5267 Panicoideae View MSA
124578419 5269 Grass View MSA
121349093 5274 Embryophyte View MSA
123428824 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.219     High High
cufflinks 49.89     High  
cufflinks 16.332     High Low
cufflinks 14.972     High Low
cufflinks 21.99     High  
cufflinks 44.488     High  
cufflinks 83.471     High High
cufflinks 37.49     High  
cufflinks 67.288     High High
cufflinks 24.566     High  
cufflinks 58.809     High High
cufflinks 13.881     High Low
cufflinks 21.428     High  
cufflinks 18.988     High  
cufflinks 23.237     High  
cufflinks 49.717     High  
cufflinks 10.37       Low
cufflinks 52.347     High  
cufflinks 29.476     High  
cufflinks 16.921     High  

0 Strain