Gene : Seita.9G281100 S. italica v2.2
Genomic Order:  2811 Name:  ? Seita.9G281100
Secondary Identifier:  ? PAC:32692902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G281100 0.5kb upstream 0.5kb upstream 842 true scaffold_9: 28133996-28134837 Setaria italica
Seita.9G281100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 28134338-28134837 Setaria italica
Seita.9G281100 0.5kb downstream 0.5kb downstream 842 true scaffold_9: 28133496-28134337 Setaria italica
Seita.9G281100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 28133496-28133995 Setaria italica
Seita.9G281100 1.0kb upstream 1.0kb upstream 1342 true scaffold_9: 28133996-28135337 Setaria italica
Seita.9G281100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 28134338-28135337 Setaria italica
Seita.9G281100 1.0kb downstream 1.0kb downstream 1342 true scaffold_9: 28132996-28134337 Setaria italica
Seita.9G281100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 28132996-28133995 Setaria italica
Seita.9G281100 2.0kb upstream 2.0kb upstream 2342 true scaffold_9: 28133996-28136337 Setaria italica
Seita.9G281100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 28134338-28136337 Setaria italica
Seita.9G281100 2.0kb downstream 2.0kb downstream 2342 true scaffold_9: 28131996-28134337 Setaria italica
Seita.9G281100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 28131996-28133995 Setaria italica
Seita.9G281100 5.0kb upstream 5.0kb upstream 5342 true scaffold_9: 28133996-28139337 Setaria italica
Seita.9G281100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 28134338-28139337 Setaria italica
Seita.9G281100 5.0kb downstream 5.0kb downstream 5342 true scaffold_9: 28128996-28134337 Setaria italica
Seita.9G281100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 28128996-28133995 Setaria italica
Seita.9G281100 10.0kb upstream 10.0kb upstream 10342 true scaffold_9: 28133996-28144337 Setaria italica
Seita.9G281100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 28134338-28144337 Setaria italica
Seita.9G281100 10.0kb downstream 10.0kb downstream 10342 true scaffold_9: 28123996-28134337 Setaria italica
Seita.9G281100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 28123996-28133995 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994570 5273 Angiosperm View MSA
122117812 5267 Panicoideae View MSA
124584771 5269 Grass View MSA
121264794 5274 Embryophyte View MSA
123303225 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.497     High  
cufflinks 27.914     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.343        
cufflinks 31.026     High  
cufflinks 11.916        
cufflinks 14.144     High  
cufflinks 18.826     High  
cufflinks 54.282     High High
cufflinks 18.569     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.395        
cufflinks 0.355        
cufflinks 0.051     Low Low
cufflinks 12.846     High  
cufflinks 0.348        
cufflinks 14.306     High  
cufflinks 0.331        
cufflinks 0.101     Low Low

0 Strain