Gene : Seita.9G278300 S. italica v2.2
Defline:  (1 of 21) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  2783
Name:  ? Seita.9G278300 Secondary Identifier:  ? PAC:32691502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G278300 0.5kb upstream 0.5kb upstream 2888 true scaffold_9: 26773641-26776528 Setaria italica
Seita.9G278300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 26776029-26776528 Setaria italica
Seita.9G278300 0.5kb downstream 0.5kb downstream 2888 true scaffold_9: 26773141-26776028 Setaria italica
Seita.9G278300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 26773141-26773640 Setaria italica
Seita.9G278300 1.0kb upstream 1.0kb upstream 3388 true scaffold_9: 26773641-26777028 Setaria italica
Seita.9G278300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 26776029-26777028 Setaria italica
Seita.9G278300 1.0kb downstream 1.0kb downstream 3388 true scaffold_9: 26772641-26776028 Setaria italica
Seita.9G278300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 26772641-26773640 Setaria italica
Seita.9G278300 2.0kb upstream 2.0kb upstream 4388 true scaffold_9: 26773641-26778028 Setaria italica
Seita.9G278300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 26776029-26778028 Setaria italica
Seita.9G278300 2.0kb downstream 2.0kb downstream 4388 true scaffold_9: 26771641-26776028 Setaria italica
Seita.9G278300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 26771641-26773640 Setaria italica
Seita.9G278300 5.0kb upstream 5.0kb upstream 7388 true scaffold_9: 26773641-26781028 Setaria italica
Seita.9G278300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 26776029-26781028 Setaria italica
Seita.9G278300 5.0kb downstream 5.0kb downstream 7388 true scaffold_9: 26768641-26776028 Setaria italica
Seita.9G278300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 26768641-26773640 Setaria italica
Seita.9G278300 10.0kb upstream 10.0kb upstream 12388 true scaffold_9: 26773641-26786028 Setaria italica
Seita.9G278300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 26776029-26786028 Setaria italica
Seita.9G278300 10.0kb downstream 10.0kb downstream 12388 true scaffold_9: 26763641-26776028 Setaria italica
Seita.9G278300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 26763641-26773640 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178787 5267 Panicoideae View MSA
124572189 5269 Grass View MSA
122046152 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.806        
cufflinks 0.851        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low Low
cufflinks 0.181        
cufflinks 1.138        
cufflinks 1.201        
cufflinks 1.109        
cufflinks 2.064        
cufflinks 0.631        
cufflinks 1.683        
cufflinks 0.869        
cufflinks 1.655        
cufflinks 0.01     Low Low
cufflinks 2.02        
cufflinks 0.324        
cufflinks 0.968        
cufflinks 0.2        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.526        

0 Strain