Gene : Seita.9G366600 S. italica v2.2
Defline:  (1 of 1) PTHR11040//PTHR11040:SF23 - ZINC/IRON TRANSPORTER Genomic Order:  3666
Name:  ? Seita.9G366600 Secondary Identifier:  ? PAC:32688330
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G366600 0.5kb upstream 0.5kb upstream 3588 true scaffold_9: 42693553-42697140 Setaria italica
Seita.9G366600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 42693553-42694052 Setaria italica
Seita.9G366600 0.5kb downstream 0.5kb downstream 3588 true scaffold_9: 42694053-42697640 Setaria italica
Seita.9G366600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 42697141-42697640 Setaria italica
Seita.9G366600 1.0kb upstream 1.0kb upstream 4088 true scaffold_9: 42693053-42697140 Setaria italica
Seita.9G366600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 42693053-42694052 Setaria italica
Seita.9G366600 1.0kb downstream 1.0kb downstream 4088 true scaffold_9: 42694053-42698140 Setaria italica
Seita.9G366600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 42697141-42698140 Setaria italica
Seita.9G366600 2.0kb upstream 2.0kb upstream 5088 true scaffold_9: 42692053-42697140 Setaria italica
Seita.9G366600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 42692053-42694052 Setaria italica
Seita.9G366600 2.0kb downstream 2.0kb downstream 5088 true scaffold_9: 42694053-42699140 Setaria italica
Seita.9G366600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 42697141-42699140 Setaria italica
Seita.9G366600 5.0kb upstream 5.0kb upstream 8088 true scaffold_9: 42689053-42697140 Setaria italica
Seita.9G366600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 42689053-42694052 Setaria italica
Seita.9G366600 5.0kb downstream 5.0kb downstream 8088 true scaffold_9: 42694053-42702140 Setaria italica
Seita.9G366600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 42697141-42702140 Setaria italica
Seita.9G366600 10.0kb upstream 10.0kb upstream 13088 true scaffold_9: 42684053-42697140 Setaria italica
Seita.9G366600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 42684053-42694052 Setaria italica
Seita.9G366600 10.0kb downstream 10.0kb downstream 13088 true scaffold_9: 42694053-42707140 Setaria italica
Seita.9G366600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 42697141-42707140 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187406 5267 Panicoideae View MSA
124579067 5269 Grass View MSA
122044792 5273 Angiosperm View MSA
121349012 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.389        
cufflinks 3.03        
cufflinks 2.612        
cufflinks 2.166        
cufflinks 2.909        
cufflinks 3.55        
cufflinks 1.754        
cufflinks 1.778        
cufflinks 1.234        
cufflinks 3.793        
cufflinks 2.051        
cufflinks 0.896        
cufflinks 3.348        
cufflinks 14.031     High High
cufflinks 1.753        
cufflinks 0.575       Low
cufflinks 0.616       Low
cufflinks 0.407       Low
cufflinks 4.721       High
cufflinks 1.949        

0 Strain