Gene : Seita.9G369500 S. italica v2.2
Defline:  (1 of 1) PTHR23423:SF10 - TRANSMEMBRANE PROTEIN 184C Genomic Order:  3695
Name:  ? Seita.9G369500 Secondary Identifier:  ? PAC:32687658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G369500 0.5kb upstream 0.5kb upstream 3755 true scaffold_9: 42942229-42945983 Setaria italica
Seita.9G369500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 42945484-42945983 Setaria italica
Seita.9G369500 0.5kb downstream 0.5kb downstream 3755 true scaffold_9: 42941729-42945483 Setaria italica
Seita.9G369500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 42941729-42942228 Setaria italica
Seita.9G369500 1.0kb upstream 1.0kb upstream 4255 true scaffold_9: 42942229-42946483 Setaria italica
Seita.9G369500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 42945484-42946483 Setaria italica
Seita.9G369500 1.0kb downstream 1.0kb downstream 4255 true scaffold_9: 42941229-42945483 Setaria italica
Seita.9G369500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 42941229-42942228 Setaria italica
Seita.9G369500 2.0kb upstream 2.0kb upstream 5255 true scaffold_9: 42942229-42947483 Setaria italica
Seita.9G369500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 42945484-42947483 Setaria italica
Seita.9G369500 2.0kb downstream 2.0kb downstream 5255 true scaffold_9: 42940229-42945483 Setaria italica
Seita.9G369500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 42940229-42942228 Setaria italica
Seita.9G369500 5.0kb upstream 5.0kb upstream 8255 true scaffold_9: 42942229-42950483 Setaria italica
Seita.9G369500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 42945484-42950483 Setaria italica
Seita.9G369500 5.0kb downstream 5.0kb downstream 8255 true scaffold_9: 42937229-42945483 Setaria italica
Seita.9G369500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 42937229-42942228 Setaria italica
Seita.9G369500 10.0kb upstream 10.0kb upstream 13255 true scaffold_9: 42942229-42955483 Setaria italica
Seita.9G369500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 42945484-42955483 Setaria italica
Seita.9G369500 10.0kb downstream 10.0kb downstream 13255 true scaffold_9: 42932229-42945483 Setaria italica
Seita.9G369500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 42932229-42942228 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026542 5273 Angiosperm View MSA
122178663 5267 Panicoideae View MSA
124571464 5269 Grass View MSA
121296376 5274 Embryophyte View MSA
123427407 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.151        
cufflinks 5.921        
cufflinks 7.165        
cufflinks 5.909        
cufflinks 2.524       Low
cufflinks 5.063        
cufflinks 2.947       Low
cufflinks 4.584        
cufflinks 2.293       Low
cufflinks 4.672        
cufflinks 3.882        
cufflinks 9.914       High
cufflinks 4.207        
cufflinks 3.132       Low
cufflinks 4.839        
cufflinks 7.998       High
cufflinks 6.973        
cufflinks 10.572       High
cufflinks 6.061        
cufflinks 7.979       High

0 Strain