Gene : Seita.9G395700 S. italica v2.2
Defline:  (1 of 71) KOG0254 - Predicted transporter (major facilitator superfamily) Genomic Order:  3957
Name:  ? Seita.9G395700 Secondary Identifier:  ? PAC:32687044
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G395700 0.5kb upstream 0.5kb upstream 5634 true scaffold_9: 45741220-45746853 Setaria italica
Seita.9G395700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 45741220-45741719 Setaria italica
Seita.9G395700 0.5kb downstream 0.5kb downstream 5634 true scaffold_9: 45741720-45747353 Setaria italica
Seita.9G395700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 45746854-45747353 Setaria italica
Seita.9G395700 1.0kb upstream 1.0kb upstream 6134 true scaffold_9: 45740720-45746853 Setaria italica
Seita.9G395700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 45740720-45741719 Setaria italica
Seita.9G395700 1.0kb downstream 1.0kb downstream 6134 true scaffold_9: 45741720-45747853 Setaria italica
Seita.9G395700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 45746854-45747853 Setaria italica
Seita.9G395700 2.0kb upstream 2.0kb upstream 7134 true scaffold_9: 45739720-45746853 Setaria italica
Seita.9G395700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 45739720-45741719 Setaria italica
Seita.9G395700 2.0kb downstream 2.0kb downstream 7134 true scaffold_9: 45741720-45748853 Setaria italica
Seita.9G395700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 45746854-45748853 Setaria italica
Seita.9G395700 5.0kb upstream 5.0kb upstream 10134 true scaffold_9: 45736720-45746853 Setaria italica
Seita.9G395700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 45736720-45741719 Setaria italica
Seita.9G395700 5.0kb downstream 5.0kb downstream 10134 true scaffold_9: 45741720-45751853 Setaria italica
Seita.9G395700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 45746854-45751853 Setaria italica
Seita.9G395700 10.0kb upstream 10.0kb upstream 15134 true scaffold_9: 45731720-45746853 Setaria italica
Seita.9G395700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 45731720-45741719 Setaria italica
Seita.9G395700 10.0kb downstream 10.0kb downstream 15134 true scaffold_9: 45741720-45756853 Setaria italica
Seita.9G395700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 45746854-45756853 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176364 5267 Panicoideae View MSA
124577330 5269 Grass View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.452        
cufflinks 0.526        
cufflinks 2.417        
cufflinks 2.643        
cufflinks 3.155       High
cufflinks 0.497        
cufflinks 2.71        
cufflinks 1.941        
cufflinks 1.706        
cufflinks 0.273     Low  
cufflinks 0.316        
cufflinks 0.034     Low Low
cufflinks 0.073     Low Low
cufflinks 0.641        
cufflinks 0.033     Low Low
cufflinks 6.294       High
cufflinks 0.048     Low Low
cufflinks 1.164        
cufflinks 2.514        
cufflinks 0.036     Low Low

0 Strain