Gene : Seita.9G397100 S. italica v2.2
Defline:  (1 of 3) 1.8.4.12 - Peptide-methionine (R)-S-oxide reductase / Selenoprotein R Genomic Order:  3971
Name:  ? Seita.9G397100 Secondary Identifier:  ? PAC:32688000
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G397100 0.5kb upstream 0.5kb upstream 3376 true scaffold_9: 45829706-45833081 Setaria italica
Seita.9G397100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 45832582-45833081 Setaria italica
Seita.9G397100 0.5kb downstream 0.5kb downstream 3376 true scaffold_9: 45829206-45832581 Setaria italica
Seita.9G397100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 45829206-45829705 Setaria italica
Seita.9G397100 1.0kb upstream 1.0kb upstream 3876 true scaffold_9: 45829706-45833581 Setaria italica
Seita.9G397100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 45832582-45833581 Setaria italica
Seita.9G397100 1.0kb downstream 1.0kb downstream 3876 true scaffold_9: 45828706-45832581 Setaria italica
Seita.9G397100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 45828706-45829705 Setaria italica
Seita.9G397100 2.0kb upstream 2.0kb upstream 4876 true scaffold_9: 45829706-45834581 Setaria italica
Seita.9G397100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 45832582-45834581 Setaria italica
Seita.9G397100 2.0kb downstream 2.0kb downstream 4876 true scaffold_9: 45827706-45832581 Setaria italica
Seita.9G397100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 45827706-45829705 Setaria italica
Seita.9G397100 5.0kb upstream 5.0kb upstream 7876 true scaffold_9: 45829706-45837581 Setaria italica
Seita.9G397100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 45832582-45837581 Setaria italica
Seita.9G397100 5.0kb downstream 5.0kb downstream 7876 true scaffold_9: 45824706-45832581 Setaria italica
Seita.9G397100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 45824706-45829705 Setaria italica
Seita.9G397100 10.0kb upstream 10.0kb upstream 12876 true scaffold_9: 45829706-45842581 Setaria italica
Seita.9G397100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 45832582-45842581 Setaria italica
Seita.9G397100 10.0kb downstream 10.0kb downstream 12876 true scaffold_9: 45819706-45832581 Setaria italica
Seita.9G397100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 45819706-45829705 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177171 5267 Panicoideae View MSA
124580066 5269 Grass View MSA
122047974 5273 Angiosperm View MSA
121348855 5274 Embryophyte View MSA
123426618 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.303     High  
cufflinks 15.335     High  
cufflinks 13.331     High  
cufflinks 16.242     High  
cufflinks 11.633     High Low
cufflinks 15.149     High  
cufflinks 13.713     High  
cufflinks 17.472     High  
cufflinks 8.712       Low
cufflinks 28.573     High High
cufflinks 12.348        
cufflinks 19.635     High  
cufflinks 26.293     High High
cufflinks 19.906     High  
cufflinks 20.811     High  
cufflinks 12.96     High  
cufflinks 27.586     High High
cufflinks 10.449       Low
cufflinks 24.447     High High
cufflinks 22.373     High  

0 Strain