Gene : Seita.9G400200 S. italica v2.2
Defline:  (1 of 1) PTHR10502:SF104 - ANNEXIN D4 Genomic Order:  4002
Name:  ? Seita.9G400200 Secondary Identifier:  ? PAC:32691867
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G400200 0.5kb upstream 0.5kb upstream 2352 true scaffold_9: 46074188-46076539 Setaria italica
Seita.9G400200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 46074188-46074687 Setaria italica
Seita.9G400200 0.5kb downstream 0.5kb downstream 2352 true scaffold_9: 46074688-46077039 Setaria italica
Seita.9G400200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 46076540-46077039 Setaria italica
Seita.9G400200 1.0kb upstream 1.0kb upstream 2852 true scaffold_9: 46073688-46076539 Setaria italica
Seita.9G400200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 46073688-46074687 Setaria italica
Seita.9G400200 1.0kb downstream 1.0kb downstream 2852 true scaffold_9: 46074688-46077539 Setaria italica
Seita.9G400200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 46076540-46077539 Setaria italica
Seita.9G400200 2.0kb upstream 2.0kb upstream 3852 true scaffold_9: 46072688-46076539 Setaria italica
Seita.9G400200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 46072688-46074687 Setaria italica
Seita.9G400200 2.0kb downstream 2.0kb downstream 3852 true scaffold_9: 46074688-46078539 Setaria italica
Seita.9G400200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 46076540-46078539 Setaria italica
Seita.9G400200 5.0kb upstream 5.0kb upstream 6852 true scaffold_9: 46069688-46076539 Setaria italica
Seita.9G400200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 46069688-46074687 Setaria italica
Seita.9G400200 5.0kb downstream 5.0kb downstream 6852 true scaffold_9: 46074688-46081539 Setaria italica
Seita.9G400200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 46076540-46081539 Setaria italica
Seita.9G400200 10.0kb upstream 10.0kb upstream 11852 true scaffold_9: 46064688-46076539 Setaria italica
Seita.9G400200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 46064688-46074687 Setaria italica
Seita.9G400200 10.0kb downstream 10.0kb downstream 11852 true scaffold_9: 46074688-46086539 Setaria italica
Seita.9G400200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 46076540-46086539 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026387 5273 Angiosperm View MSA
122176044 5267 Panicoideae View MSA
124582502 5269 Grass View MSA
121296305 5274 Embryophyte View MSA
123334492 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low  
cufflinks 0.111     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.018     Low  
cufflinks 0.059     Low  
cufflinks 0.091     Low  
cufflinks 4.006       High
cufflinks 0.156        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  

0 Strain