Gene : Seita.9G400800 S. italica v2.2
Defline:  (1 of 1) KOG3123 - Diphthine synthase Genomic Order:  4008
Name:  ? Seita.9G400800 Secondary Identifier:  ? PAC:32687038
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G400800 0.5kb upstream 0.5kb upstream 4005 true scaffold_9: 46106912-46110916 Setaria italica
Seita.9G400800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 46106912-46107411 Setaria italica
Seita.9G400800 0.5kb downstream 0.5kb downstream 4005 true scaffold_9: 46107412-46111416 Setaria italica
Seita.9G400800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 46110917-46111416 Setaria italica
Seita.9G400800 1.0kb upstream 1.0kb upstream 4505 true scaffold_9: 46106412-46110916 Setaria italica
Seita.9G400800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 46106412-46107411 Setaria italica
Seita.9G400800 1.0kb downstream 1.0kb downstream 4505 true scaffold_9: 46107412-46111916 Setaria italica
Seita.9G400800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 46110917-46111916 Setaria italica
Seita.9G400800 2.0kb upstream 2.0kb upstream 5505 true scaffold_9: 46105412-46110916 Setaria italica
Seita.9G400800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 46105412-46107411 Setaria italica
Seita.9G400800 2.0kb downstream 2.0kb downstream 5505 true scaffold_9: 46107412-46112916 Setaria italica
Seita.9G400800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 46110917-46112916 Setaria italica
Seita.9G400800 5.0kb upstream 5.0kb upstream 8505 true scaffold_9: 46102412-46110916 Setaria italica
Seita.9G400800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 46102412-46107411 Setaria italica
Seita.9G400800 5.0kb downstream 5.0kb downstream 8505 true scaffold_9: 46107412-46115916 Setaria italica
Seita.9G400800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 46110917-46115916 Setaria italica
Seita.9G400800 10.0kb upstream 10.0kb upstream 13505 true scaffold_9: 46097412-46110916 Setaria italica
Seita.9G400800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 46097412-46107411 Setaria italica
Seita.9G400800 10.0kb downstream 10.0kb downstream 13505 true scaffold_9: 46107412-46120916 Setaria italica
Seita.9G400800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 46110917-46120916 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185750 5267 Panicoideae View MSA
124580396 5269 Grass View MSA
122041685 5273 Angiosperm View MSA
121345013 5274 Embryophyte View MSA
123423829 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.111        
cufflinks 2.73        
cufflinks 1.186       Low
cufflinks 0.697       Low
cufflinks 0.759       Low
cufflinks 2.73        
cufflinks 1.511        
cufflinks 3.389        
cufflinks 2.21        
cufflinks 3.971       High
cufflinks 2.217        
cufflinks 3.287        
cufflinks 1.78        
cufflinks 2.462        
cufflinks 2.925        
cufflinks 1.434        
cufflinks 4.163       High
cufflinks 1.967        
cufflinks 1.126       Low
cufflinks 3.734       High

0 Strain