Gene : Seita.9G399400 S. italica v2.2
Defline:  (1 of 123) PF07762 - Protein of unknown function (DUF1618) (DUF1618) Genomic Order:  3994
Name:  ? Seita.9G399400 Secondary Identifier:  ? PAC:32689676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G399400 0.5kb upstream 0.5kb upstream 4652 true scaffold_9: 46022816-46027467 Setaria italica
Seita.9G399400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 46026968-46027467 Setaria italica
Seita.9G399400 0.5kb downstream 0.5kb downstream 4652 true scaffold_9: 46022316-46026967 Setaria italica
Seita.9G399400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 46022316-46022815 Setaria italica
Seita.9G399400 1.0kb upstream 1.0kb upstream 5152 true scaffold_9: 46022816-46027967 Setaria italica
Seita.9G399400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 46026968-46027967 Setaria italica
Seita.9G399400 1.0kb downstream 1.0kb downstream 5152 true scaffold_9: 46021816-46026967 Setaria italica
Seita.9G399400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 46021816-46022815 Setaria italica
Seita.9G399400 2.0kb upstream 2.0kb upstream 6152 true scaffold_9: 46022816-46028967 Setaria italica
Seita.9G399400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 46026968-46028967 Setaria italica
Seita.9G399400 2.0kb downstream 2.0kb downstream 6152 true scaffold_9: 46020816-46026967 Setaria italica
Seita.9G399400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 46020816-46022815 Setaria italica
Seita.9G399400 5.0kb upstream 5.0kb upstream 9152 true scaffold_9: 46022816-46031967 Setaria italica
Seita.9G399400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 46026968-46031967 Setaria italica
Seita.9G399400 5.0kb downstream 5.0kb downstream 9152 true scaffold_9: 46017816-46026967 Setaria italica
Seita.9G399400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 46017816-46022815 Setaria italica
Seita.9G399400 10.0kb upstream 10.0kb upstream 14152 true scaffold_9: 46022816-46036967 Setaria italica
Seita.9G399400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 46026968-46036967 Setaria italica
Seita.9G399400 10.0kb downstream 10.0kb downstream 14152 true scaffold_9: 46012816-46026967 Setaria italica
Seita.9G399400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 46012816-46022815 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
122199307 5267 Panicoideae View MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.049     Low  
cufflinks 0.06     Low  
cufflinks 0.105        
cufflinks 0.117        
cufflinks 0.107        
cufflinks 0.061     Low  
cufflinks 0.086     Low  
cufflinks 0.041     Low  
cufflinks 0.059     Low  
cufflinks 0.234     Low High
cufflinks 0.022     Low Low
cufflinks 0.033     Low Low
cufflinks 0.08     Low  
cufflinks 0.121     Low  
cufflinks 0.06     Low  
cufflinks 0.1     Low  
cufflinks 0.067     Low  
cufflinks 0.033     Low Low
cufflinks 0.117        
cufflinks 0.086     Low  

0 Strain