Gene : Seita.9G403300 S. italica v2.2
Defline:  (1 of 4) PTHR21713 - NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Genomic Order:  4033
Name:  ? Seita.9G403300 Secondary Identifier:  ? PAC:32691235
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G403300 0.5kb upstream 0.5kb upstream 4083 true scaffold_9: 46272516-46276598 Setaria italica
Seita.9G403300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 46276099-46276598 Setaria italica
Seita.9G403300 0.5kb downstream 0.5kb downstream 4083 true scaffold_9: 46272016-46276098 Setaria italica
Seita.9G403300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 46272016-46272515 Setaria italica
Seita.9G403300 1.0kb upstream 1.0kb upstream 4583 true scaffold_9: 46272516-46277098 Setaria italica
Seita.9G403300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 46276099-46277098 Setaria italica
Seita.9G403300 1.0kb downstream 1.0kb downstream 4583 true scaffold_9: 46271516-46276098 Setaria italica
Seita.9G403300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 46271516-46272515 Setaria italica
Seita.9G403300 2.0kb upstream 2.0kb upstream 5583 true scaffold_9: 46272516-46278098 Setaria italica
Seita.9G403300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 46276099-46278098 Setaria italica
Seita.9G403300 2.0kb downstream 2.0kb downstream 5583 true scaffold_9: 46270516-46276098 Setaria italica
Seita.9G403300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 46270516-46272515 Setaria italica
Seita.9G403300 5.0kb upstream 5.0kb upstream 8583 true scaffold_9: 46272516-46281098 Setaria italica
Seita.9G403300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 46276099-46281098 Setaria italica
Seita.9G403300 5.0kb downstream 5.0kb downstream 8583 true scaffold_9: 46267516-46276098 Setaria italica
Seita.9G403300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 46267516-46272515 Setaria italica
Seita.9G403300 10.0kb upstream 10.0kb upstream 13583 true scaffold_9: 46272516-46286098 Setaria italica
Seita.9G403300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 46276099-46286098 Setaria italica
Seita.9G403300 10.0kb downstream 10.0kb downstream 13583 true scaffold_9: 46262516-46276098 Setaria italica
Seita.9G403300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 46262516-46272515 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188305 5267 Panicoideae View MSA
124588662 5269 Grass View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.192     High  
cufflinks 53.32     High  
cufflinks 15.222     High Low
cufflinks 14.102     High Low
cufflinks 17.613     High Low
cufflinks 59.374     High  
cufflinks 30.814     High  
cufflinks 66.753     High High
cufflinks 42.042     High  
cufflinks 74.354     High High
cufflinks 48.196     High  
cufflinks 50.778     High  
cufflinks 42.73     High  
cufflinks 20.875     High Low
cufflinks 57.315     High  
cufflinks 19.881     High Low
cufflinks 79.997     High High
cufflinks 37.253     High  
cufflinks 15.975     High Low
cufflinks 67.793     High High

0 Strain