Gene : Seita.9G402500 S. italica v2.2
Defline:  (1 of 1) PTHR20863//PTHR20863:SF37 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED Genomic Order:  4025
Name:  ? Seita.9G402500 Secondary Identifier:  ? PAC:32689254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G402500 0.5kb upstream 0.5kb upstream 4185 true scaffold_9: 46209502-46213686 Setaria italica
Seita.9G402500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 46209502-46210001 Setaria italica
Seita.9G402500 0.5kb downstream 0.5kb downstream 4185 true scaffold_9: 46210002-46214186 Setaria italica
Seita.9G402500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 46213687-46214186 Setaria italica
Seita.9G402500 1.0kb upstream 1.0kb upstream 4685 true scaffold_9: 46209002-46213686 Setaria italica
Seita.9G402500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 46209002-46210001 Setaria italica
Seita.9G402500 1.0kb downstream 1.0kb downstream 4685 true scaffold_9: 46210002-46214686 Setaria italica
Seita.9G402500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 46213687-46214686 Setaria italica
Seita.9G402500 2.0kb upstream 2.0kb upstream 5685 true scaffold_9: 46208002-46213686 Setaria italica
Seita.9G402500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 46208002-46210001 Setaria italica
Seita.9G402500 2.0kb downstream 2.0kb downstream 5685 true scaffold_9: 46210002-46215686 Setaria italica
Seita.9G402500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 46213687-46215686 Setaria italica
Seita.9G402500 5.0kb upstream 5.0kb upstream 8685 true scaffold_9: 46205002-46213686 Setaria italica
Seita.9G402500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 46205002-46210001 Setaria italica
Seita.9G402500 5.0kb downstream 5.0kb downstream 8685 true scaffold_9: 46210002-46218686 Setaria italica
Seita.9G402500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 46213687-46218686 Setaria italica
Seita.9G402500 10.0kb upstream 10.0kb upstream 13685 true scaffold_9: 46200002-46213686 Setaria italica
Seita.9G402500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 46200002-46210001 Setaria italica
Seita.9G402500 10.0kb downstream 10.0kb downstream 13685 true scaffold_9: 46210002-46223686 Setaria italica
Seita.9G402500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 46213687-46223686 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175657 5267 Panicoideae View MSA
124585029 5269 Grass View MSA
122046821 5273 Angiosperm View MSA
121348807 5274 Embryophyte View MSA
123423791 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.318        
cufflinks 5.486        
cufflinks 0.963       Low
cufflinks 0.997       Low
cufflinks 1.911        
cufflinks 4.617        
cufflinks 3.333        
cufflinks 12.183       High
cufflinks 5.68        
cufflinks 12.222       High
cufflinks 5.536        
cufflinks 7.779        
cufflinks 6.426        
cufflinks 2.65        
cufflinks 6.744        
cufflinks 2.229        
cufflinks 10.014       High
cufflinks 1.77       Low
cufflinks 1.307       Low
cufflinks 9.083       High

0 Strain