Gene : Seita.9G327400 S. italica v2.2
Defline:  (1 of 1) PTHR33317:SF2 - HOLLIDAY JUNCTION RESOLVASE-RELATED Genomic Order:  3274
Name:  ? Seita.9G327400 Secondary Identifier:  ? PAC:32687008
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G327400 0.5kb upstream 0.5kb upstream 2455 true scaffold_9: 38105334-38107788 Setaria italica
Seita.9G327400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 38105334-38105833 Setaria italica
Seita.9G327400 0.5kb downstream 0.5kb downstream 2455 true scaffold_9: 38105834-38108288 Setaria italica
Seita.9G327400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 38107789-38108288 Setaria italica
Seita.9G327400 1.0kb upstream 1.0kb upstream 2955 true scaffold_9: 38104834-38107788 Setaria italica
Seita.9G327400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 38104834-38105833 Setaria italica
Seita.9G327400 1.0kb downstream 1.0kb downstream 2955 true scaffold_9: 38105834-38108788 Setaria italica
Seita.9G327400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 38107789-38108788 Setaria italica
Seita.9G327400 2.0kb upstream 2.0kb upstream 3955 true scaffold_9: 38103834-38107788 Setaria italica
Seita.9G327400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 38103834-38105833 Setaria italica
Seita.9G327400 2.0kb downstream 2.0kb downstream 3955 true scaffold_9: 38105834-38109788 Setaria italica
Seita.9G327400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 38107789-38109788 Setaria italica
Seita.9G327400 5.0kb upstream 5.0kb upstream 6955 true scaffold_9: 38100834-38107788 Setaria italica
Seita.9G327400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 38100834-38105833 Setaria italica
Seita.9G327400 5.0kb downstream 5.0kb downstream 6955 true scaffold_9: 38105834-38112788 Setaria italica
Seita.9G327400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 38107789-38112788 Setaria italica
Seita.9G327400 10.0kb upstream 10.0kb upstream 11955 true scaffold_9: 38095834-38107788 Setaria italica
Seita.9G327400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 38095834-38105833 Setaria italica
Seita.9G327400 10.0kb downstream 10.0kb downstream 11955 true scaffold_9: 38105834-38117788 Setaria italica
Seita.9G327400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 38107789-38117788 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187456 5267 Panicoideae View MSA
124574564 5269 Grass View MSA
122046304 5273 Angiosperm View MSA
121343915 5274 Embryophyte View MSA
123426695 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.257        
cufflinks 0.902        
cufflinks 0.504        
cufflinks 0.499        
cufflinks 1.284        
cufflinks 0.873        
cufflinks 1.462        
cufflinks 2.912       High
cufflinks 3.02       High
cufflinks 1.46        
cufflinks 0.888        
cufflinks 0.19       Low
cufflinks 0.292        
cufflinks 1.183        
cufflinks 0.167       Low
cufflinks 1.747       High
cufflinks 0.212       Low
cufflinks 0.628        
cufflinks 0.215       Low
cufflinks 0.206       Low

0 Strain