Gene : Seita.9G327600 S. italica v2.2
Defline:  (1 of 1) PTHR31807:SF10 - QWRF MOTIF-CONTAINING PROTEIN 7 Genomic Order:  3276
Name:  ? Seita.9G327600 Secondary Identifier:  ? PAC:32692806
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G327600 0.5kb upstream 0.5kb upstream 2849 true scaffold_9: 38160758-38163606 Setaria italica
Seita.9G327600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 38160758-38161257 Setaria italica
Seita.9G327600 0.5kb downstream 0.5kb downstream 2849 true scaffold_9: 38161258-38164106 Setaria italica
Seita.9G327600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 38163607-38164106 Setaria italica
Seita.9G327600 1.0kb upstream 1.0kb upstream 3349 true scaffold_9: 38160258-38163606 Setaria italica
Seita.9G327600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 38160258-38161257 Setaria italica
Seita.9G327600 1.0kb downstream 1.0kb downstream 3349 true scaffold_9: 38161258-38164606 Setaria italica
Seita.9G327600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 38163607-38164606 Setaria italica
Seita.9G327600 2.0kb upstream 2.0kb upstream 4349 true scaffold_9: 38159258-38163606 Setaria italica
Seita.9G327600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 38159258-38161257 Setaria italica
Seita.9G327600 2.0kb downstream 2.0kb downstream 4349 true scaffold_9: 38161258-38165606 Setaria italica
Seita.9G327600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 38163607-38165606 Setaria italica
Seita.9G327600 5.0kb upstream 5.0kb upstream 7349 true scaffold_9: 38156258-38163606 Setaria italica
Seita.9G327600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 38156258-38161257 Setaria italica
Seita.9G327600 5.0kb downstream 5.0kb downstream 7349 true scaffold_9: 38161258-38168606 Setaria italica
Seita.9G327600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 38163607-38168606 Setaria italica
Seita.9G327600 10.0kb upstream 10.0kb upstream 12349 true scaffold_9: 38151258-38163606 Setaria italica
Seita.9G327600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 38151258-38161257 Setaria italica
Seita.9G327600 10.0kb downstream 10.0kb downstream 12349 true scaffold_9: 38161258-38173606 Setaria italica
Seita.9G327600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 38163607-38173606 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175568 5267 Panicoideae View MSA
124579439 5269 Grass View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.227        
cufflinks 1.945       High
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.129        
cufflinks 3.573       High
cufflinks 0.85        
cufflinks 0.728        
cufflinks 0.642        
cufflinks 0.838        
cufflinks 0.235        
cufflinks 0.372        
cufflinks 2.214       High
cufflinks 0.235        
cufflinks 1.254        
cufflinks 0.025     Low Low
cufflinks 0.385        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low Low
cufflinks 1.226        

0 Strain