Gene : Seita.9G326200 S. italica v2.2
Genomic Order:  3262 Name:  ? Seita.9G326200
Secondary Identifier:  ? PAC:32692399
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G326200 0.5kb upstream 0.5kb upstream 4691 true scaffold_9: 37834551-37839241 Setaria italica
Seita.9G326200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 37838742-37839241 Setaria italica
Seita.9G326200 0.5kb downstream 0.5kb downstream 4691 true scaffold_9: 37834051-37838741 Setaria italica
Seita.9G326200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 37834051-37834550 Setaria italica
Seita.9G326200 1.0kb upstream 1.0kb upstream 5191 true scaffold_9: 37834551-37839741 Setaria italica
Seita.9G326200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 37838742-37839741 Setaria italica
Seita.9G326200 1.0kb downstream 1.0kb downstream 5191 true scaffold_9: 37833551-37838741 Setaria italica
Seita.9G326200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 37833551-37834550 Setaria italica
Seita.9G326200 2.0kb upstream 2.0kb upstream 6191 true scaffold_9: 37834551-37840741 Setaria italica
Seita.9G326200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 37838742-37840741 Setaria italica
Seita.9G326200 2.0kb downstream 2.0kb downstream 6191 true scaffold_9: 37832551-37838741 Setaria italica
Seita.9G326200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 37832551-37834550 Setaria italica
Seita.9G326200 5.0kb upstream 5.0kb upstream 9191 true scaffold_9: 37834551-37843741 Setaria italica
Seita.9G326200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 37838742-37843741 Setaria italica
Seita.9G326200 5.0kb downstream 5.0kb downstream 9191 true scaffold_9: 37829551-37838741 Setaria italica
Seita.9G326200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 37829551-37834550 Setaria italica
Seita.9G326200 10.0kb upstream 10.0kb upstream 14191 true scaffold_9: 37834551-37848741 Setaria italica
Seita.9G326200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 37838742-37848741 Setaria italica
Seita.9G326200 10.0kb downstream 10.0kb downstream 14191 true scaffold_9: 37824551-37838741 Setaria italica
Seita.9G326200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 37824551-37834550 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121843880 5273 Angiosperm View MSA
122117248 5267 Panicoideae View MSA
124411451 5269 Grass View MSA
121114611 5274 Embryophyte View MSA
123153803 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.021     Low  
cufflinks 0.089     Low High
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain