Gene : Seita.9G350900 S. italica v2.2
Defline:  (1 of 1) PTHR21320:SF0 - METHYLTRANSFERASE-LIKE PROTEIN 17, MITOCHONDRIAL Genomic Order:  3509
Name:  ? Seita.9G350900 Secondary Identifier:  ? PAC:32693351
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G350900 0.5kb upstream 0.5kb upstream 5513 true scaffold_9: 41058984-41064496 Setaria italica
Seita.9G350900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41058984-41059483 Setaria italica
Seita.9G350900 0.5kb downstream 0.5kb downstream 5513 true scaffold_9: 41059484-41064996 Setaria italica
Seita.9G350900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41064497-41064996 Setaria italica
Seita.9G350900 1.0kb upstream 1.0kb upstream 6013 true scaffold_9: 41058484-41064496 Setaria italica
Seita.9G350900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41058484-41059483 Setaria italica
Seita.9G350900 1.0kb downstream 1.0kb downstream 6013 true scaffold_9: 41059484-41065496 Setaria italica
Seita.9G350900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41064497-41065496 Setaria italica
Seita.9G350900 2.0kb upstream 2.0kb upstream 7013 true scaffold_9: 41057484-41064496 Setaria italica
Seita.9G350900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41057484-41059483 Setaria italica
Seita.9G350900 2.0kb downstream 2.0kb downstream 7013 true scaffold_9: 41059484-41066496 Setaria italica
Seita.9G350900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41064497-41066496 Setaria italica
Seita.9G350900 5.0kb upstream 5.0kb upstream 10013 true scaffold_9: 41054484-41064496 Setaria italica
Seita.9G350900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41054484-41059483 Setaria italica
Seita.9G350900 5.0kb downstream 5.0kb downstream 10013 true scaffold_9: 41059484-41069496 Setaria italica
Seita.9G350900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41064497-41069496 Setaria italica
Seita.9G350900 10.0kb upstream 10.0kb upstream 15013 true scaffold_9: 41049484-41064496 Setaria italica
Seita.9G350900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41049484-41059483 Setaria italica
Seita.9G350900 10.0kb downstream 10.0kb downstream 15013 true scaffold_9: 41059484-41074496 Setaria italica
Seita.9G350900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41064497-41074496 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182514 5267 Panicoideae View MSA
124576913 5269 Grass View MSA
122046431 5273 Angiosperm View MSA
121344700 5274 Embryophyte View MSA
123426720 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.085        
cufflinks 1.535       High
cufflinks 0.589        
cufflinks 0.281       Low
cufflinks 0.409       Low
cufflinks 1.58       High
cufflinks 0.844        
cufflinks 1.024        
cufflinks 1.381        
cufflinks 1.218        
cufflinks 0.903        
cufflinks 1.044        
cufflinks 0.666        
cufflinks 1.594       High
cufflinks 0.976        
cufflinks 1.048        
cufflinks 1.371        
cufflinks 1.066        
cufflinks 0.418       Low
cufflinks 1.11        

0 Strain