Gene : Seita.9G363200 S. italica v2.2
Defline:  (1 of 1) KOG2962 - Prohibitin-related membrane protease subunits Genomic Order:  3632
Name:  ? Seita.9G363200 Secondary Identifier:  ? PAC:32689145
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G363200 0.5kb upstream 0.5kb upstream 6842 true scaffold_9: 42394088-42400929 Setaria italica
Seita.9G363200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 42400430-42400929 Setaria italica
Seita.9G363200 0.5kb downstream 0.5kb downstream 6842 true scaffold_9: 42393588-42400429 Setaria italica
Seita.9G363200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 42393588-42394087 Setaria italica
Seita.9G363200 1.0kb upstream 1.0kb upstream 7342 true scaffold_9: 42394088-42401429 Setaria italica
Seita.9G363200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 42400430-42401429 Setaria italica
Seita.9G363200 1.0kb downstream 1.0kb downstream 7342 true scaffold_9: 42393088-42400429 Setaria italica
Seita.9G363200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 42393088-42394087 Setaria italica
Seita.9G363200 2.0kb upstream 2.0kb upstream 8342 true scaffold_9: 42394088-42402429 Setaria italica
Seita.9G363200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 42400430-42402429 Setaria italica
Seita.9G363200 2.0kb downstream 2.0kb downstream 8342 true scaffold_9: 42392088-42400429 Setaria italica
Seita.9G363200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 42392088-42394087 Setaria italica
Seita.9G363200 5.0kb upstream 5.0kb upstream 11342 true scaffold_9: 42394088-42405429 Setaria italica
Seita.9G363200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 42400430-42405429 Setaria italica
Seita.9G363200 5.0kb downstream 5.0kb downstream 11342 true scaffold_9: 42389088-42400429 Setaria italica
Seita.9G363200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 42389088-42394087 Setaria italica
Seita.9G363200 10.0kb upstream 10.0kb upstream 16342 true scaffold_9: 42394088-42410429 Setaria italica
Seita.9G363200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 42400430-42410429 Setaria italica
Seita.9G363200 10.0kb downstream 10.0kb downstream 16342 true scaffold_9: 42384088-42400429 Setaria italica
Seita.9G363200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 42384088-42394087 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177965 5267 Panicoideae View MSA
124568616 5269 Grass View MSA
122049377 5273 Angiosperm View MSA
121346622 5274 Embryophyte View MSA
123424219 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.263        
cufflinks 5.547        
cufflinks 2.655       Low
cufflinks 2.373       Low
cufflinks 2.279       Low
cufflinks 5.728        
cufflinks 3.59        
cufflinks 4.255        
cufflinks 3.367        
cufflinks 2.906        
cufflinks 4.547        
cufflinks 7.243       High
cufflinks 4.292        
cufflinks 3.571        
cufflinks 6.764       High
cufflinks 2.342       Low
cufflinks 6.553       High
cufflinks 4.037        
cufflinks 3.225        
cufflinks 6.377       High

0 Strain