Gene : Seita.9G447500 S. italica v2.2
Defline:  (1 of 1) PTHR20938:SF0 - INTEGRATOR COMPLEX SUBUNIT 4-RELATED Genomic Order:  4475
Name:  ? Seita.9G447500 Secondary Identifier:  ? PAC:32687624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G447500 0.5kb upstream 0.5kb upstream 6403 true scaffold_9: 49641851-49648253 Setaria italica
Seita.9G447500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 49641851-49642350 Setaria italica
Seita.9G447500 0.5kb downstream 0.5kb downstream 6403 true scaffold_9: 49642351-49648753 Setaria italica
Seita.9G447500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 49648254-49648753 Setaria italica
Seita.9G447500 1.0kb upstream 1.0kb upstream 6903 true scaffold_9: 49641351-49648253 Setaria italica
Seita.9G447500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 49641351-49642350 Setaria italica
Seita.9G447500 1.0kb downstream 1.0kb downstream 6903 true scaffold_9: 49642351-49649253 Setaria italica
Seita.9G447500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 49648254-49649253 Setaria italica
Seita.9G447500 2.0kb upstream 2.0kb upstream 7903 true scaffold_9: 49640351-49648253 Setaria italica
Seita.9G447500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 49640351-49642350 Setaria italica
Seita.9G447500 2.0kb downstream 2.0kb downstream 7903 true scaffold_9: 49642351-49650253 Setaria italica
Seita.9G447500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 49648254-49650253 Setaria italica
Seita.9G447500 5.0kb upstream 5.0kb upstream 10903 true scaffold_9: 49637351-49648253 Setaria italica
Seita.9G447500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 49637351-49642350 Setaria italica
Seita.9G447500 5.0kb downstream 5.0kb downstream 10903 true scaffold_9: 49642351-49653253 Setaria italica
Seita.9G447500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 49648254-49653253 Setaria italica
Seita.9G447500 10.0kb upstream 10.0kb upstream 15903 true scaffold_9: 49632351-49648253 Setaria italica
Seita.9G447500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 49632351-49642350 Setaria italica
Seita.9G447500 10.0kb downstream 10.0kb downstream 15903 true scaffold_9: 49642351-49658253 Setaria italica
Seita.9G447500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 49648254-49658253 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187607 5267 Panicoideae View MSA
124582333 5269 Grass View MSA
122048339 5273 Angiosperm View MSA
121350116 5274 Embryophyte View MSA
123381584 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.548        
cufflinks 0.679        
cufflinks 0.662        
cufflinks 0.43        
cufflinks 0.423        
cufflinks 0.643        
cufflinks 0.985       High
cufflinks 0.579        
cufflinks 0.878        
cufflinks 0.19     Low Low
cufflinks 0.46        
cufflinks 0.631        
cufflinks 0.557        
cufflinks 0.775        
cufflinks 1.361       High
cufflinks 0.62        
cufflinks 0.535        
cufflinks 0.453        
cufflinks 0.429        
cufflinks 0.867        

0 Strain