Gene : Seita.9G455100 S. italica v2.2
Defline:  (1 of 1) PTHR11960:SF18 - 4EHP, ISOFORM B Genomic Order:  4551
Name:  ? Seita.9G455100 Secondary Identifier:  ? PAC:32691997
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G455100 0.5kb upstream 0.5kb upstream 4260 true scaffold_9: 50262255-50266514 Setaria italica
Seita.9G455100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 50266015-50266514 Setaria italica
Seita.9G455100 0.5kb downstream 0.5kb downstream 4260 true scaffold_9: 50261755-50266014 Setaria italica
Seita.9G455100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 50261755-50262254 Setaria italica
Seita.9G455100 1.0kb upstream 1.0kb upstream 4760 true scaffold_9: 50262255-50267014 Setaria italica
Seita.9G455100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 50266015-50267014 Setaria italica
Seita.9G455100 1.0kb downstream 1.0kb downstream 4760 true scaffold_9: 50261255-50266014 Setaria italica
Seita.9G455100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 50261255-50262254 Setaria italica
Seita.9G455100 2.0kb upstream 2.0kb upstream 5760 true scaffold_9: 50262255-50268014 Setaria italica
Seita.9G455100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 50266015-50268014 Setaria italica
Seita.9G455100 2.0kb downstream 2.0kb downstream 5760 true scaffold_9: 50260255-50266014 Setaria italica
Seita.9G455100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 50260255-50262254 Setaria italica
Seita.9G455100 5.0kb upstream 5.0kb upstream 8760 true scaffold_9: 50262255-50271014 Setaria italica
Seita.9G455100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 50266015-50271014 Setaria italica
Seita.9G455100 5.0kb downstream 5.0kb downstream 8760 true scaffold_9: 50257255-50266014 Setaria italica
Seita.9G455100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 50257255-50262254 Setaria italica
Seita.9G455100 10.0kb upstream 10.0kb upstream 13760 true scaffold_9: 50262255-50276014 Setaria italica
Seita.9G455100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 50266015-50276014 Setaria italica
Seita.9G455100 10.0kb downstream 10.0kb downstream 13760 true scaffold_9: 50252255-50266014 Setaria italica
Seita.9G455100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 50252255-50262254 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185326 5267 Panicoideae View MSA
124572867 5269 Grass View MSA
122047051 5273 Angiosperm View MSA
121344049 5274 Embryophyte View MSA
123379965 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.39        
cufflinks 10.289        
cufflinks 4.784       Low
cufflinks 5.965       Low
cufflinks 5.477       Low
cufflinks 9.837        
cufflinks 7.513        
cufflinks 12.292        
cufflinks 8.441        
cufflinks 28.826     High High
cufflinks 11.628        
cufflinks 12.711        
cufflinks 10.431        
cufflinks 7.6        
cufflinks 11.256        
cufflinks 9.225        
cufflinks 14.631     High  
cufflinks 21.275     High High
cufflinks 6.346       Low
cufflinks 12.043        

0 Strain