Gene : Seita.9G454600 S. italica v2.2
Defline:  (1 of 1) PTHR10527:SF6 - IMPORTIN-4 Genomic Order:  4546
Name:  ? Seita.9G454600 Secondary Identifier:  ? PAC:32693634
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G454600 0.5kb upstream 0.5kb upstream 9616 true scaffold_9: 50206381-50215996 Setaria italica
Seita.9G454600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 50215497-50215996 Setaria italica
Seita.9G454600 0.5kb downstream 0.5kb downstream 9616 true scaffold_9: 50205881-50215496 Setaria italica
Seita.9G454600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 50205881-50206380 Setaria italica
Seita.9G454600 1.0kb upstream 1.0kb upstream 10116 true scaffold_9: 50206381-50216496 Setaria italica
Seita.9G454600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 50215497-50216496 Setaria italica
Seita.9G454600 1.0kb downstream 1.0kb downstream 10116 true scaffold_9: 50205381-50215496 Setaria italica
Seita.9G454600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 50205381-50206380 Setaria italica
Seita.9G454600 2.0kb upstream 2.0kb upstream 11116 true scaffold_9: 50206381-50217496 Setaria italica
Seita.9G454600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 50215497-50217496 Setaria italica
Seita.9G454600 2.0kb downstream 2.0kb downstream 11116 true scaffold_9: 50204381-50215496 Setaria italica
Seita.9G454600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 50204381-50206380 Setaria italica
Seita.9G454600 5.0kb upstream 5.0kb upstream 14116 true scaffold_9: 50206381-50220496 Setaria italica
Seita.9G454600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 50215497-50220496 Setaria italica
Seita.9G454600 5.0kb downstream 5.0kb downstream 14116 true scaffold_9: 50201381-50215496 Setaria italica
Seita.9G454600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 50201381-50206380 Setaria italica
Seita.9G454600 10.0kb upstream 10.0kb upstream 19116 true scaffold_9: 50206381-50225496 Setaria italica
Seita.9G454600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 50215497-50225496 Setaria italica
Seita.9G454600 10.0kb downstream 10.0kb downstream 19116 true scaffold_9: 50196381-50215496 Setaria italica
Seita.9G454600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 50196381-50206380 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182676 5267 Panicoideae View MSA
124580948 5269 Grass View MSA
122049923 5273 Angiosperm View MSA
123429119 5275 Viridiplantae View MSA
121344058 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.17       High
cufflinks 10.807       High
cufflinks 6.186        
cufflinks 3.161       Low
cufflinks 4.908       Low
cufflinks 11.138       High
cufflinks 7.173        
cufflinks 6.2        
cufflinks 11.375       High
cufflinks 5.864        
cufflinks 9.968        
cufflinks 6.675        
cufflinks 7.488        
cufflinks 8.383        
cufflinks 8.274        
cufflinks 9.265        
cufflinks 7.101        
cufflinks 7.352        
cufflinks 3.497       Low
cufflinks 8.306        

0 Strain