Gene : Seita.9G458400 S. italica v2.2
Defline:  (1 of 1) PTHR10663//PTHR10663:SF147 - GUANYL-NUCLEOTIDE EXCHANGE FACTOR Genomic Order:  4584
Name:  ? Seita.9G458400 Secondary Identifier:  ? PAC:32693695
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G458400 0.5kb upstream 0.5kb upstream 7750 true scaffold_9: 50457321-50465070 Setaria italica
Seita.9G458400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 50457321-50457820 Setaria italica
Seita.9G458400 0.5kb downstream 0.5kb downstream 7750 true scaffold_9: 50457821-50465570 Setaria italica
Seita.9G458400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 50465071-50465570 Setaria italica
Seita.9G458400 1.0kb upstream 1.0kb upstream 8250 true scaffold_9: 50456821-50465070 Setaria italica
Seita.9G458400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 50456821-50457820 Setaria italica
Seita.9G458400 1.0kb downstream 1.0kb downstream 8250 true scaffold_9: 50457821-50466070 Setaria italica
Seita.9G458400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 50465071-50466070 Setaria italica
Seita.9G458400 2.0kb upstream 2.0kb upstream 9250 true scaffold_9: 50455821-50465070 Setaria italica
Seita.9G458400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 50455821-50457820 Setaria italica
Seita.9G458400 2.0kb downstream 2.0kb downstream 9250 true scaffold_9: 50457821-50467070 Setaria italica
Seita.9G458400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 50465071-50467070 Setaria italica
Seita.9G458400 5.0kb upstream 5.0kb upstream 12250 true scaffold_9: 50452821-50465070 Setaria italica
Seita.9G458400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 50452821-50457820 Setaria italica
Seita.9G458400 5.0kb downstream 5.0kb downstream 12250 true scaffold_9: 50457821-50470070 Setaria italica
Seita.9G458400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 50465071-50470070 Setaria italica
Seita.9G458400 10.0kb upstream 10.0kb upstream 17250 true scaffold_9: 50447821-50465070 Setaria italica
Seita.9G458400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 50447821-50457820 Setaria italica
Seita.9G458400 10.0kb downstream 10.0kb downstream 17250 true scaffold_9: 50457821-50475070 Setaria italica
Seita.9G458400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 50465071-50475070 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178269 5267 Panicoideae View MSA
124571116 5269 Grass View MSA
122043052 5273 Angiosperm View MSA
121310069 5274 Embryophyte View MSA
123347662 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.324        
cufflinks 3.631        
cufflinks 3.238       Low
cufflinks 5.571        
cufflinks 7.152        
cufflinks 4.052        
cufflinks 9.381       High
cufflinks 3.51       Low
cufflinks 6.592        
cufflinks 3.855        
cufflinks 4.449        
cufflinks 4.213        
cufflinks 5.415        
cufflinks 4.018        
cufflinks 3.806        
cufflinks 11.145       High
cufflinks 3.587        
cufflinks 7.903       High
cufflinks 6.632        
cufflinks 3.937        

0 Strain