Gene : Seita.9G460800 S. italica v2.2
Defline:  (1 of 1) PTHR23148 - SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN Genomic Order:  4608
Name:  ? Seita.9G460800 Secondary Identifier:  ? PAC:32689453
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G460800 0.5kb upstream 0.5kb upstream 9122 true scaffold_9: 50632215-50641336 Setaria italica
Seita.9G460800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 50640837-50641336 Setaria italica
Seita.9G460800 0.5kb downstream 0.5kb downstream 9122 true scaffold_9: 50631715-50640836 Setaria italica
Seita.9G460800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 50631715-50632214 Setaria italica
Seita.9G460800 1.0kb upstream 1.0kb upstream 9622 true scaffold_9: 50632215-50641836 Setaria italica
Seita.9G460800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 50640837-50641836 Setaria italica
Seita.9G460800 1.0kb downstream 1.0kb downstream 9622 true scaffold_9: 50631215-50640836 Setaria italica
Seita.9G460800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 50631215-50632214 Setaria italica
Seita.9G460800 2.0kb upstream 2.0kb upstream 10622 true scaffold_9: 50632215-50642836 Setaria italica
Seita.9G460800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 50640837-50642836 Setaria italica
Seita.9G460800 2.0kb downstream 2.0kb downstream 10622 true scaffold_9: 50630215-50640836 Setaria italica
Seita.9G460800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 50630215-50632214 Setaria italica
Seita.9G460800 5.0kb upstream 5.0kb upstream 13622 true scaffold_9: 50632215-50645836 Setaria italica
Seita.9G460800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 50640837-50645836 Setaria italica
Seita.9G460800 5.0kb downstream 5.0kb downstream 13622 true scaffold_9: 50627215-50640836 Setaria italica
Seita.9G460800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 50627215-50632214 Setaria italica
Seita.9G460800 10.0kb upstream 10.0kb upstream 18622 true scaffold_9: 50632215-50650836 Setaria italica
Seita.9G460800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 50640837-50650836 Setaria italica
Seita.9G460800 10.0kb downstream 10.0kb downstream 18622 true scaffold_9: 50622215-50640836 Setaria italica
Seita.9G460800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 50622215-50632214 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186245 5267 Panicoideae View MSA
124580940 5269 Grass View MSA
122044269 5273 Angiosperm View MSA
121345775 5274 Embryophyte View MSA
123427375 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.102     High High
cufflinks 7.011        
cufflinks 7.841        
cufflinks 8.137        
cufflinks 7.465        
cufflinks 7.734        
cufflinks 6.888        
cufflinks 6.796        
cufflinks 7.796        
cufflinks 4.868       Low
cufflinks 9.734        
cufflinks 9.321        
cufflinks 6.95        
cufflinks 5.496       Low
cufflinks 7.755        
cufflinks 15.987     High High
cufflinks 8.224        
cufflinks 22.487     High High
cufflinks 5.516       Low
cufflinks 6.913        

0 Strain