Gene : Seita.9G465600 S. italica v2.2
Defline:  (1 of 45) PF03101 - FAR1 DNA-binding domain (FAR1) Genomic Order:  4656
Name:  ? Seita.9G465600 Secondary Identifier:  ? PAC:32687640
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G465600 0.5kb upstream 0.5kb upstream 5759 true scaffold_9: 50955716-50961474 Setaria italica
Seita.9G465600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 50960975-50961474 Setaria italica
Seita.9G465600 0.5kb downstream 0.5kb downstream 5759 true scaffold_9: 50955216-50960974 Setaria italica
Seita.9G465600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 50955216-50955715 Setaria italica
Seita.9G465600 1.0kb upstream 1.0kb upstream 6259 true scaffold_9: 50955716-50961974 Setaria italica
Seita.9G465600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 50960975-50961974 Setaria italica
Seita.9G465600 1.0kb downstream 1.0kb downstream 6259 true scaffold_9: 50954716-50960974 Setaria italica
Seita.9G465600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 50954716-50955715 Setaria italica
Seita.9G465600 2.0kb upstream 2.0kb upstream 7259 true scaffold_9: 50955716-50962974 Setaria italica
Seita.9G465600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 50960975-50962974 Setaria italica
Seita.9G465600 2.0kb downstream 2.0kb downstream 7259 true scaffold_9: 50953716-50960974 Setaria italica
Seita.9G465600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 50953716-50955715 Setaria italica
Seita.9G465600 5.0kb upstream 5.0kb upstream 10259 true scaffold_9: 50955716-50965974 Setaria italica
Seita.9G465600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 50960975-50965974 Setaria italica
Seita.9G465600 5.0kb downstream 5.0kb downstream 10259 true scaffold_9: 50950716-50960974 Setaria italica
Seita.9G465600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 50950716-50955715 Setaria italica
Seita.9G465600 10.0kb upstream 10.0kb upstream 15259 true scaffold_9: 50955716-50970974 Setaria italica
Seita.9G465600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 50960975-50970974 Setaria italica
Seita.9G465600 10.0kb downstream 10.0kb downstream 15259 true scaffold_9: 50945716-50960974 Setaria italica
Seita.9G465600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 50945716-50955715 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184298 5267 Panicoideae View MSA
124570347 5269 Grass View MSA
122051514 5273 Angiosperm View MSA
121312532 5274 Embryophyte View MSA
123349697 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.621        
cufflinks 0.416       Low
cufflinks 11.489     High High
cufflinks 8.517        
cufflinks 6.795        
cufflinks 0.742       Low
cufflinks 5.867        
cufflinks 3.511        
cufflinks 3.749        
cufflinks 1.422       Low
cufflinks 1.946        
cufflinks 5.43        
cufflinks 5.465        
cufflinks 6.797        
cufflinks 4.204        
cufflinks 8.403        
cufflinks 4.948        
cufflinks 6.195        
cufflinks 8.459        
cufflinks 3.939        

0 Strain