Gene : Seita.9G471400 S. italica v2.2
Defline:  (1 of 110) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  4714
Name:  ? Seita.9G471400 Secondary Identifier:  ? PAC:32688020
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G471400 0.5kb upstream 0.5kb upstream 1651 true scaffold_9: 51368952-51370602 Setaria italica
Seita.9G471400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 51368952-51369451 Setaria italica
Seita.9G471400 0.5kb downstream 0.5kb downstream 1651 true scaffold_9: 51369452-51371102 Setaria italica
Seita.9G471400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 51370603-51371102 Setaria italica
Seita.9G471400 1.0kb upstream 1.0kb upstream 2151 true scaffold_9: 51368452-51370602 Setaria italica
Seita.9G471400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 51368452-51369451 Setaria italica
Seita.9G471400 1.0kb downstream 1.0kb downstream 2151 true scaffold_9: 51369452-51371602 Setaria italica
Seita.9G471400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 51370603-51371602 Setaria italica
Seita.9G471400 2.0kb upstream 2.0kb upstream 3151 true scaffold_9: 51367452-51370602 Setaria italica
Seita.9G471400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 51367452-51369451 Setaria italica
Seita.9G471400 2.0kb downstream 2.0kb downstream 3151 true scaffold_9: 51369452-51372602 Setaria italica
Seita.9G471400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 51370603-51372602 Setaria italica
Seita.9G471400 5.0kb upstream 5.0kb upstream 6151 true scaffold_9: 51364452-51370602 Setaria italica
Seita.9G471400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 51364452-51369451 Setaria italica
Seita.9G471400 5.0kb downstream 5.0kb downstream 6151 true scaffold_9: 51369452-51375602 Setaria italica
Seita.9G471400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 51370603-51375602 Setaria italica
Seita.9G471400 10.0kb upstream 10.0kb upstream 11151 true scaffold_9: 51359452-51370602 Setaria italica
Seita.9G471400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 51359452-51369451 Setaria italica
Seita.9G471400 10.0kb downstream 10.0kb downstream 11151 true scaffold_9: 51369452-51380602 Setaria italica
Seita.9G471400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 51370603-51380602 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188337 5267 Panicoideae View MSA
124581861 5269 Grass View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.395       Low
cufflinks 0.7        
cufflinks 5.861       High
cufflinks 2.964        
cufflinks 1.513        
cufflinks 0.932        
cufflinks 0.921        
cufflinks 4.444        
cufflinks 0.178       Low
cufflinks 2.539        
cufflinks 0.382       Low
cufflinks 0.929        
cufflinks 3.372        
cufflinks 10.182       High
cufflinks 2.139        
cufflinks 1.027        
cufflinks 3.061        
cufflinks 0.147       Low
cufflinks 4.14        
cufflinks 3.375        

0 Strain