Gene : Seita.9G473100 S. italica v2.2
Defline:  (1 of 3) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  4731
Name:  ? Seita.9G473100 Secondary Identifier:  ? PAC:32690636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G473100 0.5kb upstream 0.5kb upstream 3943 true scaffold_9: 51512457-51516399 Setaria italica
Seita.9G473100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 51512457-51512956 Setaria italica
Seita.9G473100 0.5kb downstream 0.5kb downstream 3943 true scaffold_9: 51512957-51516899 Setaria italica
Seita.9G473100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 51516400-51516899 Setaria italica
Seita.9G473100 1.0kb upstream 1.0kb upstream 4443 true scaffold_9: 51511957-51516399 Setaria italica
Seita.9G473100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 51511957-51512956 Setaria italica
Seita.9G473100 1.0kb downstream 1.0kb downstream 4443 true scaffold_9: 51512957-51517399 Setaria italica
Seita.9G473100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 51516400-51517399 Setaria italica
Seita.9G473100 2.0kb upstream 2.0kb upstream 5443 true scaffold_9: 51510957-51516399 Setaria italica
Seita.9G473100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 51510957-51512956 Setaria italica
Seita.9G473100 2.0kb downstream 2.0kb downstream 5443 true scaffold_9: 51512957-51518399 Setaria italica
Seita.9G473100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 51516400-51518399 Setaria italica
Seita.9G473100 5.0kb upstream 5.0kb upstream 8443 true scaffold_9: 51507957-51516399 Setaria italica
Seita.9G473100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 51507957-51512956 Setaria italica
Seita.9G473100 5.0kb downstream 5.0kb downstream 8443 true scaffold_9: 51512957-51521399 Setaria italica
Seita.9G473100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 51516400-51521399 Setaria italica
Seita.9G473100 10.0kb upstream 10.0kb upstream 13443 true scaffold_9: 51502957-51516399 Setaria italica
Seita.9G473100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 51502957-51512956 Setaria italica
Seita.9G473100 10.0kb downstream 10.0kb downstream 13443 true scaffold_9: 51512957-51526399 Setaria italica
Seita.9G473100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 51516400-51526399 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186600 5267 Panicoideae View MSA
124571985 5269 Grass View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.926     High High
cufflinks 4.932       Low
cufflinks 3.179       Low
cufflinks 3.828       Low
cufflinks 6.554        
cufflinks 3.697       Low
cufflinks 10.307        
cufflinks 6.069        
cufflinks 14.298     High  
cufflinks 20.134     High  
cufflinks 20.539     High  
cufflinks 28.585     High High
cufflinks 15.099     High  
cufflinks 33.164     High High
cufflinks 17.541     High  
cufflinks 11.266        
cufflinks 15.383     High  
cufflinks 30.646     High High
cufflinks 8.368        
cufflinks 13.41        

0 Strain