Gene : Seita.9G472300 S. italica v2.2
Defline:  (1 of 1) PTHR23310:SF14 - PROTEIN ACBP-7 Genomic Order:  4723
Name:  ? Seita.9G472300 Secondary Identifier:  ? PAC:32689246
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G472300 0.5kb upstream 0.5kb upstream 8008 true scaffold_9: 51447224-51455231 Setaria italica
Seita.9G472300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 51454732-51455231 Setaria italica
Seita.9G472300 0.5kb downstream 0.5kb downstream 8008 true scaffold_9: 51446724-51454731 Setaria italica
Seita.9G472300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 51446724-51447223 Setaria italica
Seita.9G472300 1.0kb upstream 1.0kb upstream 8508 true scaffold_9: 51447224-51455731 Setaria italica
Seita.9G472300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 51454732-51455731 Setaria italica
Seita.9G472300 1.0kb downstream 1.0kb downstream 8508 true scaffold_9: 51446224-51454731 Setaria italica
Seita.9G472300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 51446224-51447223 Setaria italica
Seita.9G472300 2.0kb upstream 2.0kb upstream 9508 true scaffold_9: 51447224-51456731 Setaria italica
Seita.9G472300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 51454732-51456731 Setaria italica
Seita.9G472300 2.0kb downstream 2.0kb downstream 9508 true scaffold_9: 51445224-51454731 Setaria italica
Seita.9G472300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 51445224-51447223 Setaria italica
Seita.9G472300 5.0kb upstream 5.0kb upstream 12508 true scaffold_9: 51447224-51459731 Setaria italica
Seita.9G472300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 51454732-51459731 Setaria italica
Seita.9G472300 5.0kb downstream 5.0kb downstream 12508 true scaffold_9: 51442224-51454731 Setaria italica
Seita.9G472300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 51442224-51447223 Setaria italica
Seita.9G472300 10.0kb upstream 10.0kb upstream 17508 true scaffold_9: 51447224-51464731 Setaria italica
Seita.9G472300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 51454732-51464731 Setaria italica
Seita.9G472300 10.0kb downstream 10.0kb downstream 17508 true scaffold_9: 51437224-51454731 Setaria italica
Seita.9G472300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 51437224-51447223 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197064 5267 Panicoideae View MSA
124578175 5269 Grass View MSA
122045367 5273 Angiosperm View MSA
121350915 5274 Embryophyte View MSA
123427551 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.898        
cufflinks 4.577        
cufflinks 6.105        
cufflinks 6.832        
cufflinks 5.049        
cufflinks 4.488        
cufflinks 5.671        
cufflinks 3.357       Low
cufflinks 3.406       Low
cufflinks 3.494       Low
cufflinks 5.289        
cufflinks 18.933     High High
cufflinks 10.663       High
cufflinks 2.526       Low
cufflinks 5.131        
cufflinks 6.383        
cufflinks 8.14        
cufflinks 17.838     High High
cufflinks 4.848        
cufflinks 8.436        

0 Strain