Gene : Seita.9G472600 S. italica v2.2
Defline:  (1 of 1) PTHR11913:SF16 - ACTIN-DEPOLYMERIZING FACTOR 5-RELATED Genomic Order:  4726
Name:  ? Seita.9G472600 Secondary Identifier:  ? PAC:32691427
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G472600 0.5kb upstream 0.5kb upstream 2954 true scaffold_9: 51467362-51470315 Setaria italica
Seita.9G472600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 51467362-51467861 Setaria italica
Seita.9G472600 0.5kb downstream 0.5kb downstream 2954 true scaffold_9: 51467862-51470815 Setaria italica
Seita.9G472600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 51470316-51470815 Setaria italica
Seita.9G472600 1.0kb upstream 1.0kb upstream 3454 true scaffold_9: 51466862-51470315 Setaria italica
Seita.9G472600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 51466862-51467861 Setaria italica
Seita.9G472600 1.0kb downstream 1.0kb downstream 3454 true scaffold_9: 51467862-51471315 Setaria italica
Seita.9G472600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 51470316-51471315 Setaria italica
Seita.9G472600 2.0kb upstream 2.0kb upstream 4454 true scaffold_9: 51465862-51470315 Setaria italica
Seita.9G472600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 51465862-51467861 Setaria italica
Seita.9G472600 2.0kb downstream 2.0kb downstream 4454 true scaffold_9: 51467862-51472315 Setaria italica
Seita.9G472600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 51470316-51472315 Setaria italica
Seita.9G472600 5.0kb upstream 5.0kb upstream 7454 true scaffold_9: 51462862-51470315 Setaria italica
Seita.9G472600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 51462862-51467861 Setaria italica
Seita.9G472600 5.0kb downstream 5.0kb downstream 7454 true scaffold_9: 51467862-51475315 Setaria italica
Seita.9G472600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 51470316-51475315 Setaria italica
Seita.9G472600 10.0kb upstream 10.0kb upstream 12454 true scaffold_9: 51457862-51470315 Setaria italica
Seita.9G472600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 51457862-51467861 Setaria italica
Seita.9G472600 10.0kb downstream 10.0kb downstream 12454 true scaffold_9: 51467862-51480315 Setaria italica
Seita.9G472600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 51470316-51480315 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193453 5267 Panicoideae View MSA
124572495 5269 Grass View MSA
122046307 5273 Angiosperm View MSA
121310587 5274 Embryophyte View MSA
123348034 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.396     High  
cufflinks 23.24     High  
cufflinks 15.957     High  
cufflinks 28.536     High  
cufflinks 19.45     High  
cufflinks 32.013     High  
cufflinks 13.615     High Low
cufflinks 23.09     High  
cufflinks 18.77     High  
cufflinks 32.465     High  
cufflinks 19.203     High  
cufflinks 24.854     High  
cufflinks 83.865     High High
cufflinks 17.772     High  
cufflinks 12.707       Low
cufflinks 19.374     High  
cufflinks 31.557     High  
cufflinks 21.131     High  
cufflinks 38.134     High High
cufflinks 23.47     High  

0 Strain