Gene : Seita.9G475800 S. italica v2.2
Defline:  (1 of 1) PTHR12925:SF0 - PROTEIN HIKESHI Genomic Order:  4758
Name:  ? Seita.9G475800 Secondary Identifier:  ? PAC:32693375
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G475800 0.5kb upstream 0.5kb upstream 3431 true scaffold_9: 51699141-51702571 Setaria italica
Seita.9G475800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 51702072-51702571 Setaria italica
Seita.9G475800 0.5kb downstream 0.5kb downstream 3431 true scaffold_9: 51698641-51702071 Setaria italica
Seita.9G475800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 51698641-51699140 Setaria italica
Seita.9G475800 1.0kb upstream 1.0kb upstream 3931 true scaffold_9: 51699141-51703071 Setaria italica
Seita.9G475800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 51702072-51703071 Setaria italica
Seita.9G475800 1.0kb downstream 1.0kb downstream 3931 true scaffold_9: 51698141-51702071 Setaria italica
Seita.9G475800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 51698141-51699140 Setaria italica
Seita.9G475800 2.0kb upstream 2.0kb upstream 4931 true scaffold_9: 51699141-51704071 Setaria italica
Seita.9G475800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 51702072-51704071 Setaria italica
Seita.9G475800 2.0kb downstream 2.0kb downstream 4931 true scaffold_9: 51697141-51702071 Setaria italica
Seita.9G475800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 51697141-51699140 Setaria italica
Seita.9G475800 5.0kb upstream 5.0kb upstream 7931 true scaffold_9: 51699141-51707071 Setaria italica
Seita.9G475800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 51702072-51707071 Setaria italica
Seita.9G475800 5.0kb downstream 5.0kb downstream 7931 true scaffold_9: 51694141-51702071 Setaria italica
Seita.9G475800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 51694141-51699140 Setaria italica
Seita.9G475800 10.0kb upstream 10.0kb upstream 12931 true scaffold_9: 51699141-51712071 Setaria italica
Seita.9G475800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 51702072-51712071 Setaria italica
Seita.9G475800 10.0kb downstream 10.0kb downstream 12931 true scaffold_9: 51689141-51702071 Setaria italica
Seita.9G475800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 51689141-51699140 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179613 5267 Panicoideae View MSA
124575718 5269 Grass View MSA
122044077 5273 Angiosperm View MSA
121345488 5274 Embryophyte View MSA
123425277 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.131        
cufflinks 0.927        
cufflinks 0.097       Low
cufflinks 0.096       Low
cufflinks 0.288        
cufflinks 0.776        
cufflinks 0.697        
cufflinks 0.727        
cufflinks 0.481        
cufflinks 2.406       High
cufflinks 0.724        
cufflinks 0.672        
cufflinks 1.041        
cufflinks 0.348        
cufflinks 0.76        
cufflinks 0.95        
cufflinks 0.752        
cufflinks 1.291        
cufflinks 0.301        
cufflinks 0.578        

0 Strain