Gene : Seita.9G474300 S. italica v2.2
Genomic Order:  4743 Name:  ? Seita.9G474300
Secondary Identifier:  ? PAC:32690737
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G474300 0.5kb upstream 0.5kb upstream 3137 true scaffold_9: 51592626-51595762 Setaria italica
Seita.9G474300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 51595263-51595762 Setaria italica
Seita.9G474300 0.5kb downstream 0.5kb downstream 3137 true scaffold_9: 51592126-51595262 Setaria italica
Seita.9G474300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 51592126-51592625 Setaria italica
Seita.9G474300 1.0kb upstream 1.0kb upstream 3637 true scaffold_9: 51592626-51596262 Setaria italica
Seita.9G474300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 51595263-51596262 Setaria italica
Seita.9G474300 1.0kb downstream 1.0kb downstream 3637 true scaffold_9: 51591626-51595262 Setaria italica
Seita.9G474300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 51591626-51592625 Setaria italica
Seita.9G474300 2.0kb upstream 2.0kb upstream 4637 true scaffold_9: 51592626-51597262 Setaria italica
Seita.9G474300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 51595263-51597262 Setaria italica
Seita.9G474300 2.0kb downstream 2.0kb downstream 4637 true scaffold_9: 51590626-51595262 Setaria italica
Seita.9G474300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 51590626-51592625 Setaria italica
Seita.9G474300 5.0kb upstream 5.0kb upstream 7637 true scaffold_9: 51592626-51600262 Setaria italica
Seita.9G474300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 51595263-51600262 Setaria italica
Seita.9G474300 5.0kb downstream 5.0kb downstream 7637 true scaffold_9: 51587626-51595262 Setaria italica
Seita.9G474300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 51587626-51592625 Setaria italica
Seita.9G474300 10.0kb upstream 10.0kb upstream 12637 true scaffold_9: 51592626-51605262 Setaria italica
Seita.9G474300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 51595263-51605262 Setaria italica
Seita.9G474300 10.0kb downstream 10.0kb downstream 12637 true scaffold_9: 51582626-51595262 Setaria italica
Seita.9G474300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 51582626-51592625 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177922 5267 Panicoideae View MSA
124569581 5269 Grass View MSA
122049864 5273 Angiosperm View MSA
121348970 5274 Embryophyte View MSA
123381106 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.994        
cufflinks 2.239        
cufflinks 3.958       High
cufflinks 2.544        
cufflinks 2.55        
cufflinks 2.492        
cufflinks 2.153        
cufflinks 2.489        
cufflinks 2.761        
cufflinks 1.521       Low
cufflinks 1.74       Low
cufflinks 2.18        
cufflinks 1.75       Low
cufflinks 3.11       High
cufflinks 2.533        
cufflinks 1.942        
cufflinks 2.326        
cufflinks 2.182        
cufflinks 2.656        
cufflinks 2.084        

0 Strain