Gene : Seita.9G407600 S. italica v2.2
Defline:  (1 of 1) PTHR31087:SF25 - PROTEIN LURP-ONE-RELATED 4 Genomic Order:  4076
Name:  ? Seita.9G407600 Secondary Identifier:  ? PAC:32691965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G407600 0.5kb upstream 0.5kb upstream 1857 true scaffold_9: 46689661-46691517 Setaria italica
Seita.9G407600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 46691018-46691517 Setaria italica
Seita.9G407600 0.5kb downstream 0.5kb downstream 1857 true scaffold_9: 46689161-46691017 Setaria italica
Seita.9G407600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 46689161-46689660 Setaria italica
Seita.9G407600 1.0kb upstream 1.0kb upstream 2357 true scaffold_9: 46689661-46692017 Setaria italica
Seita.9G407600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 46691018-46692017 Setaria italica
Seita.9G407600 1.0kb downstream 1.0kb downstream 2357 true scaffold_9: 46688661-46691017 Setaria italica
Seita.9G407600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 46688661-46689660 Setaria italica
Seita.9G407600 2.0kb upstream 2.0kb upstream 3357 true scaffold_9: 46689661-46693017 Setaria italica
Seita.9G407600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 46691018-46693017 Setaria italica
Seita.9G407600 2.0kb downstream 2.0kb downstream 3357 true scaffold_9: 46687661-46691017 Setaria italica
Seita.9G407600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 46687661-46689660 Setaria italica
Seita.9G407600 5.0kb upstream 5.0kb upstream 6357 true scaffold_9: 46689661-46696017 Setaria italica
Seita.9G407600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 46691018-46696017 Setaria italica
Seita.9G407600 5.0kb downstream 5.0kb downstream 6357 true scaffold_9: 46684661-46691017 Setaria italica
Seita.9G407600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 46684661-46689660 Setaria italica
Seita.9G407600 10.0kb upstream 10.0kb upstream 11357 true scaffold_9: 46689661-46701017 Setaria italica
Seita.9G407600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 46691018-46701017 Setaria italica
Seita.9G407600 10.0kb downstream 10.0kb downstream 11357 true scaffold_9: 46679661-46691017 Setaria italica
Seita.9G407600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 46679661-46689660 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179218 5267 Panicoideae View MSA
124584609 5269 Grass View MSA
122048996 5273 Angiosperm View MSA
121311201 5274 Embryophyte View MSA
123348527 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.147        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.987        
cufflinks 0.824        
cufflinks 19.327     High High
cufflinks 2.32        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.037        
cufflinks 0.014     Low Low
cufflinks 7.012       High
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.172        

0 Strain