Gene : Seita.9G405600 S. italica v2.2
Defline:  (1 of 1) PTHR32370:SF30 - BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 Genomic Order:  4056
Name:  ? Seita.9G405600 Secondary Identifier:  ? PAC:32688121
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G405600 0.5kb upstream 0.5kb upstream 3525 true scaffold_9: 46483667-46487191 Setaria italica
Seita.9G405600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 46483667-46484166 Setaria italica
Seita.9G405600 0.5kb downstream 0.5kb downstream 3525 true scaffold_9: 46484167-46487691 Setaria italica
Seita.9G405600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 46487192-46487691 Setaria italica
Seita.9G405600 1.0kb upstream 1.0kb upstream 4025 true scaffold_9: 46483167-46487191 Setaria italica
Seita.9G405600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 46483167-46484166 Setaria italica
Seita.9G405600 1.0kb downstream 1.0kb downstream 4025 true scaffold_9: 46484167-46488191 Setaria italica
Seita.9G405600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 46487192-46488191 Setaria italica
Seita.9G405600 2.0kb upstream 2.0kb upstream 5025 true scaffold_9: 46482167-46487191 Setaria italica
Seita.9G405600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 46482167-46484166 Setaria italica
Seita.9G405600 2.0kb downstream 2.0kb downstream 5025 true scaffold_9: 46484167-46489191 Setaria italica
Seita.9G405600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 46487192-46489191 Setaria italica
Seita.9G405600 5.0kb upstream 5.0kb upstream 8025 true scaffold_9: 46479167-46487191 Setaria italica
Seita.9G405600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 46479167-46484166 Setaria italica
Seita.9G405600 5.0kb downstream 5.0kb downstream 8025 true scaffold_9: 46484167-46492191 Setaria italica
Seita.9G405600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 46487192-46492191 Setaria italica
Seita.9G405600 10.0kb upstream 10.0kb upstream 13025 true scaffold_9: 46474167-46487191 Setaria italica
Seita.9G405600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 46474167-46484166 Setaria italica
Seita.9G405600 10.0kb downstream 10.0kb downstream 13025 true scaffold_9: 46484167-46497191 Setaria italica
Seita.9G405600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 46487192-46497191 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176481 5267 Panicoideae View MSA
124573781 5269 Grass View MSA
122042362 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.209        
cufflinks 0.09     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.106     Low  
cufflinks 0.056     Low  
cufflinks 0.364        
cufflinks 0.026     Low Low
cufflinks 2.195        
cufflinks 0.524        
cufflinks 1.627        
cufflinks 2.899       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.731       High
cufflinks 0.006     Low Low
cufflinks 2.86       High
cufflinks 0.023     Low Low
cufflinks 0.009     Low Low
cufflinks 6.22       High

0 Strain