Gene : Seita.9G414600 S. italica v2.2
Genomic Order:  4146 Name:  ? Seita.9G414600
Secondary Identifier:  ? PAC:32689431
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G414600 0.5kb upstream 0.5kb upstream 6281 true scaffold_9: 47197975-47204255 Setaria italica
Seita.9G414600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 47197975-47198474 Setaria italica
Seita.9G414600 0.5kb downstream 0.5kb downstream 6281 true scaffold_9: 47198475-47204755 Setaria italica
Seita.9G414600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 47204256-47204755 Setaria italica
Seita.9G414600 1.0kb upstream 1.0kb upstream 6781 true scaffold_9: 47197475-47204255 Setaria italica
Seita.9G414600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 47197475-47198474 Setaria italica
Seita.9G414600 1.0kb downstream 1.0kb downstream 6781 true scaffold_9: 47198475-47205255 Setaria italica
Seita.9G414600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 47204256-47205255 Setaria italica
Seita.9G414600 2.0kb upstream 2.0kb upstream 7781 true scaffold_9: 47196475-47204255 Setaria italica
Seita.9G414600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 47196475-47198474 Setaria italica
Seita.9G414600 2.0kb downstream 2.0kb downstream 7781 true scaffold_9: 47198475-47206255 Setaria italica
Seita.9G414600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 47204256-47206255 Setaria italica
Seita.9G414600 5.0kb upstream 5.0kb upstream 10781 true scaffold_9: 47193475-47204255 Setaria italica
Seita.9G414600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 47193475-47198474 Setaria italica
Seita.9G414600 5.0kb downstream 5.0kb downstream 10781 true scaffold_9: 47198475-47209255 Setaria italica
Seita.9G414600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 47204256-47209255 Setaria italica
Seita.9G414600 10.0kb upstream 10.0kb upstream 15781 true scaffold_9: 47188475-47204255 Setaria italica
Seita.9G414600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 47188475-47198474 Setaria italica
Seita.9G414600 10.0kb downstream 10.0kb downstream 15781 true scaffold_9: 47198475-47214255 Setaria italica
Seita.9G414600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 47204256-47214255 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189610 5267 Panicoideae View MSA
124583925 5269 Grass View MSA
122046561 5273 Angiosperm View MSA
121310623 5274 Embryophyte View MSA
123348060 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.472        
cufflinks 0.677        
cufflinks 0.455        
cufflinks 0.379       Low
cufflinks 0.337       Low
cufflinks 0.675        
cufflinks 0.523        
cufflinks 0.45        
cufflinks 0.36       Low
cufflinks 0.404        
cufflinks 0.536        
cufflinks 0.816       High
cufflinks 0.716       High
cufflinks 0.503        
cufflinks 0.846       High
cufflinks 0.417        
cufflinks 0.743       High
cufflinks 0.561        
cufflinks 0.434        
cufflinks 0.743       High

0 Strain