Gene : Seita.9G414900 S. italica v2.2
Defline:  (1 of 1) PTHR24220:SF85 - ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC Genomic Order:  4149
Name:  ? Seita.9G414900 Secondary Identifier:  ? PAC:32686919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G414900 0.5kb upstream 0.5kb upstream 4571 true scaffold_9: 47218291-47222861 Setaria italica
Seita.9G414900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 47218291-47218790 Setaria italica
Seita.9G414900 0.5kb downstream 0.5kb downstream 4571 true scaffold_9: 47218791-47223361 Setaria italica
Seita.9G414900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 47222862-47223361 Setaria italica
Seita.9G414900 1.0kb upstream 1.0kb upstream 5071 true scaffold_9: 47217791-47222861 Setaria italica
Seita.9G414900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 47217791-47218790 Setaria italica
Seita.9G414900 1.0kb downstream 1.0kb downstream 5071 true scaffold_9: 47218791-47223861 Setaria italica
Seita.9G414900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 47222862-47223861 Setaria italica
Seita.9G414900 2.0kb upstream 2.0kb upstream 6071 true scaffold_9: 47216791-47222861 Setaria italica
Seita.9G414900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 47216791-47218790 Setaria italica
Seita.9G414900 2.0kb downstream 2.0kb downstream 6071 true scaffold_9: 47218791-47224861 Setaria italica
Seita.9G414900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 47222862-47224861 Setaria italica
Seita.9G414900 5.0kb upstream 5.0kb upstream 9071 true scaffold_9: 47213791-47222861 Setaria italica
Seita.9G414900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 47213791-47218790 Setaria italica
Seita.9G414900 5.0kb downstream 5.0kb downstream 9071 true scaffold_9: 47218791-47227861 Setaria italica
Seita.9G414900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 47222862-47227861 Setaria italica
Seita.9G414900 10.0kb upstream 10.0kb upstream 14071 true scaffold_9: 47208791-47222861 Setaria italica
Seita.9G414900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 47208791-47218790 Setaria italica
Seita.9G414900 10.0kb downstream 10.0kb downstream 14071 true scaffold_9: 47218791-47232861 Setaria italica
Seita.9G414900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 47222862-47232861 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198016 5267 Panicoideae View MSA
124573973 5269 Grass View MSA
122043551 5273 Angiosperm View MSA
121344782 5274 Embryophyte View MSA
123425394 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.223        
cufflinks 5.726        
cufflinks 7.686        
cufflinks 7.231        
cufflinks 10.775     High  
cufflinks 5.849        
cufflinks 11.461        
cufflinks 16.158     High High
cufflinks 20.745     High High
cufflinks 6.263        
cufflinks 5.174        
cufflinks 4.979        
cufflinks 4.329       Low
cufflinks 10.325        
cufflinks 3.579       Low
cufflinks 12.733     High High
cufflinks 4.78        
cufflinks 7.921        
cufflinks 15.399     High High
cufflinks 4.134       Low

0 Strain