Gene : Seita.9G427500 S. italica v2.2
Defline:  (1 of 1) PTHR11941//PTHR11941:SF72 - ENOYL-COA HYDRATASE-RELATED Genomic Order:  4275
Name:  ? Seita.9G427500 Secondary Identifier:  ? PAC:32686909
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G427500 0.5kb upstream 0.5kb upstream 2779 true scaffold_9: 48264512-48267290 Setaria italica
Seita.9G427500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 48266791-48267290 Setaria italica
Seita.9G427500 0.5kb downstream 0.5kb downstream 2779 true scaffold_9: 48264012-48266790 Setaria italica
Seita.9G427500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 48264012-48264511 Setaria italica
Seita.9G427500 1.0kb upstream 1.0kb upstream 3279 true scaffold_9: 48264512-48267790 Setaria italica
Seita.9G427500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 48266791-48267790 Setaria italica
Seita.9G427500 1.0kb downstream 1.0kb downstream 3279 true scaffold_9: 48263512-48266790 Setaria italica
Seita.9G427500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 48263512-48264511 Setaria italica
Seita.9G427500 2.0kb upstream 2.0kb upstream 4279 true scaffold_9: 48264512-48268790 Setaria italica
Seita.9G427500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 48266791-48268790 Setaria italica
Seita.9G427500 2.0kb downstream 2.0kb downstream 4279 true scaffold_9: 48262512-48266790 Setaria italica
Seita.9G427500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 48262512-48264511 Setaria italica
Seita.9G427500 5.0kb upstream 5.0kb upstream 7279 true scaffold_9: 48264512-48271790 Setaria italica
Seita.9G427500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 48266791-48271790 Setaria italica
Seita.9G427500 5.0kb downstream 5.0kb downstream 7279 true scaffold_9: 48259512-48266790 Setaria italica
Seita.9G427500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 48259512-48264511 Setaria italica
Seita.9G427500 10.0kb upstream 10.0kb upstream 12279 true scaffold_9: 48264512-48276790 Setaria italica
Seita.9G427500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 48266791-48276790 Setaria italica
Seita.9G427500 10.0kb downstream 10.0kb downstream 12279 true scaffold_9: 48254512-48266790 Setaria italica
Seita.9G427500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 48254512-48264511 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177713 5267 Panicoideae View MSA
124572311 5269 Grass View MSA
122050974 5273 Angiosperm View MSA
121344921 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.041     High  
cufflinks 8.34       Low
cufflinks 67.611     High High
cufflinks 102.939     High High
cufflinks 53.493     High  
cufflinks 11.557       Low
cufflinks 11.755       Low
cufflinks 28.803     High  
cufflinks 18.305     High  
cufflinks 36.861     High  
cufflinks 19.758     High  
cufflinks 45.416     High  
cufflinks 50.273     High  
cufflinks 32.57     High  
cufflinks 29.562     High  
cufflinks 15.522     High Low
cufflinks 44.161     High  
cufflinks 40.159     High  
cufflinks 48.306     High  
cufflinks 35.303     High  

0 Strain