Gene : Seita.9G430100 S. italica v2.2
Defline:  (1 of 1) PTHR20858:SF18 - PROTEIN PET18 Genomic Order:  4301
Name:  ? Seita.9G430100 Secondary Identifier:  ? PAC:32691401
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G430100 0.5kb upstream 0.5kb upstream 3003 true scaffold_9: 48436906-48439908 Setaria italica
Seita.9G430100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 48436906-48437405 Setaria italica
Seita.9G430100 0.5kb downstream 0.5kb downstream 3003 true scaffold_9: 48437406-48440408 Setaria italica
Seita.9G430100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 48439909-48440408 Setaria italica
Seita.9G430100 1.0kb upstream 1.0kb upstream 3503 true scaffold_9: 48436406-48439908 Setaria italica
Seita.9G430100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 48436406-48437405 Setaria italica
Seita.9G430100 1.0kb downstream 1.0kb downstream 3503 true scaffold_9: 48437406-48440908 Setaria italica
Seita.9G430100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 48439909-48440908 Setaria italica
Seita.9G430100 2.0kb upstream 2.0kb upstream 4503 true scaffold_9: 48435406-48439908 Setaria italica
Seita.9G430100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 48435406-48437405 Setaria italica
Seita.9G430100 2.0kb downstream 2.0kb downstream 4503 true scaffold_9: 48437406-48441908 Setaria italica
Seita.9G430100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 48439909-48441908 Setaria italica
Seita.9G430100 5.0kb upstream 5.0kb upstream 7503 true scaffold_9: 48432406-48439908 Setaria italica
Seita.9G430100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 48432406-48437405 Setaria italica
Seita.9G430100 5.0kb downstream 5.0kb downstream 7503 true scaffold_9: 48437406-48444908 Setaria italica
Seita.9G430100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 48439909-48444908 Setaria italica
Seita.9G430100 10.0kb upstream 10.0kb upstream 12503 true scaffold_9: 48427406-48439908 Setaria italica
Seita.9G430100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 48427406-48437405 Setaria italica
Seita.9G430100 10.0kb downstream 10.0kb downstream 12503 true scaffold_9: 48437406-48449908 Setaria italica
Seita.9G430100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 48439909-48449908 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181316 5267 Panicoideae View MSA
124577897 5269 Grass View MSA
122042801 5273 Angiosperm View MSA
121348004 5274 Embryophyte View MSA
123425587 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.071        
cufflinks 9.159        
cufflinks 4.496       Low
cufflinks 5.162        
cufflinks 5.056        
cufflinks 7.988        
cufflinks 5.75        
cufflinks 5.722        
cufflinks 4.283       Low
cufflinks 15.011       High
cufflinks 10.05        
cufflinks 15.442     High High
cufflinks 16.947     High High
cufflinks 6.608        
cufflinks 16.15     High High
cufflinks 4.985        
cufflinks 19.57     High High
cufflinks 6.757        
cufflinks 4.22       Low
cufflinks 18.596     High High

0 Strain