Gene : Seita.9G438200 S. italica v2.2
Defline:  (1 of 2) PTHR10602 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 Genomic Order:  4382
Name:  ? Seita.9G438200 Secondary Identifier:  ? PAC:32692943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G438200 0.5kb upstream 0.5kb upstream 3520 true scaffold_9: 49032826-49036345 Setaria italica
Seita.9G438200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 49035846-49036345 Setaria italica
Seita.9G438200 0.5kb downstream 0.5kb downstream 3520 true scaffold_9: 49032326-49035845 Setaria italica
Seita.9G438200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 49032326-49032825 Setaria italica
Seita.9G438200 1.0kb upstream 1.0kb upstream 4020 true scaffold_9: 49032826-49036845 Setaria italica
Seita.9G438200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 49035846-49036845 Setaria italica
Seita.9G438200 1.0kb downstream 1.0kb downstream 4020 true scaffold_9: 49031826-49035845 Setaria italica
Seita.9G438200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 49031826-49032825 Setaria italica
Seita.9G438200 2.0kb upstream 2.0kb upstream 5020 true scaffold_9: 49032826-49037845 Setaria italica
Seita.9G438200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 49035846-49037845 Setaria italica
Seita.9G438200 2.0kb downstream 2.0kb downstream 5020 true scaffold_9: 49030826-49035845 Setaria italica
Seita.9G438200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 49030826-49032825 Setaria italica
Seita.9G438200 5.0kb upstream 5.0kb upstream 8020 true scaffold_9: 49032826-49040845 Setaria italica
Seita.9G438200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 49035846-49040845 Setaria italica
Seita.9G438200 5.0kb downstream 5.0kb downstream 8020 true scaffold_9: 49027826-49035845 Setaria italica
Seita.9G438200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 49027826-49032825 Setaria italica
Seita.9G438200 10.0kb upstream 10.0kb upstream 13020 true scaffold_9: 49032826-49045845 Setaria italica
Seita.9G438200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 49035846-49045845 Setaria italica
Seita.9G438200 10.0kb downstream 10.0kb downstream 13020 true scaffold_9: 49022826-49035845 Setaria italica
Seita.9G438200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 49022826-49032825 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185831 5267 Panicoideae View MSA
124574377 5269 Grass View MSA
122043583 5273 Angiosperm View MSA
121345071 5274 Embryophyte View MSA
123424758 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.467     High  
cufflinks 40.235     High High
cufflinks 19.956     High  
cufflinks 17.775     High Low
cufflinks 20.383     High  
cufflinks 43.234     High High
cufflinks 23.517     High  
cufflinks 36.811     High  
cufflinks 34.942     High  
cufflinks 40.283     High High
cufflinks 33.113     High  
cufflinks 30.673     High  
cufflinks 25.3     High  
cufflinks 21.473     High  
cufflinks 37.429     High  
cufflinks 11.926     High Low
cufflinks 38.835     High  
cufflinks 14.537     High Low
cufflinks 19.768     High  
cufflinks 38.553     High  

0 Strain