Gene : Seita.9G520400 S. italica v2.2
Genomic Order:  5204 Name:  ? Seita.9G520400
Secondary Identifier:  ? PAC:32689252
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G520400 0.5kb upstream 0.5kb upstream 2546 true scaffold_9: 54921878-54924423 Setaria italica
Seita.9G520400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 54921878-54922377 Setaria italica
Seita.9G520400 0.5kb downstream 0.5kb downstream 2546 true scaffold_9: 54922378-54924923 Setaria italica
Seita.9G520400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 54924424-54924923 Setaria italica
Seita.9G520400 1.0kb upstream 1.0kb upstream 3046 true scaffold_9: 54921378-54924423 Setaria italica
Seita.9G520400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 54921378-54922377 Setaria italica
Seita.9G520400 1.0kb downstream 1.0kb downstream 3046 true scaffold_9: 54922378-54925423 Setaria italica
Seita.9G520400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 54924424-54925423 Setaria italica
Seita.9G520400 2.0kb upstream 2.0kb upstream 4046 true scaffold_9: 54920378-54924423 Setaria italica
Seita.9G520400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 54920378-54922377 Setaria italica
Seita.9G520400 2.0kb downstream 2.0kb downstream 4046 true scaffold_9: 54922378-54926423 Setaria italica
Seita.9G520400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 54924424-54926423 Setaria italica
Seita.9G520400 5.0kb upstream 5.0kb upstream 7046 true scaffold_9: 54917378-54924423 Setaria italica
Seita.9G520400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 54917378-54922377 Setaria italica
Seita.9G520400 5.0kb downstream 5.0kb downstream 7046 true scaffold_9: 54922378-54929423 Setaria italica
Seita.9G520400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 54924424-54929423 Setaria italica
Seita.9G520400 10.0kb upstream 10.0kb upstream 12046 true scaffold_9: 54912378-54924423 Setaria italica
Seita.9G520400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 54912378-54922377 Setaria italica
Seita.9G520400 10.0kb downstream 10.0kb downstream 12046 true scaffold_9: 54922378-54934423 Setaria italica
Seita.9G520400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 54924424-54934423 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175659 5267 Panicoideae View MSA
124584002 5269 Grass View MSA
122049393 5273 Angiosperm View MSA
121345648 5274 Embryophyte View MSA
123425550 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.452        
cufflinks 1.366        
cufflinks 6.591        
cufflinks 4.282        
cufflinks 7.237        
cufflinks 1.055        
cufflinks 11.618        
cufflinks 13.271       High
cufflinks 6.974        
cufflinks 0.941        
cufflinks 0.656        
cufflinks 0.153       Low
cufflinks 0.049     Low Low
cufflinks 8.388        
cufflinks 0.142       Low
cufflinks 30.597     High High
cufflinks 0.12     Low Low
cufflinks 1.908        
cufflinks 36.416     High High
cufflinks 0.201       Low

0 Strain