Gene : Seita.9G520300 S. italica v2.2
Genomic Order:  5203 Name:  ? Seita.9G520300
Secondary Identifier:  ? PAC:32690981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G520300 0.5kb upstream 0.5kb upstream 1976 true scaffold_9: 54919826-54921801 Setaria italica
Seita.9G520300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 54919826-54920325 Setaria italica
Seita.9G520300 0.5kb downstream 0.5kb downstream 1976 true scaffold_9: 54920326-54922301 Setaria italica
Seita.9G520300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 54921802-54922301 Setaria italica
Seita.9G520300 1.0kb upstream 1.0kb upstream 2476 true scaffold_9: 54919326-54921801 Setaria italica
Seita.9G520300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 54919326-54920325 Setaria italica
Seita.9G520300 1.0kb downstream 1.0kb downstream 2476 true scaffold_9: 54920326-54922801 Setaria italica
Seita.9G520300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 54921802-54922801 Setaria italica
Seita.9G520300 2.0kb upstream 2.0kb upstream 3476 true scaffold_9: 54918326-54921801 Setaria italica
Seita.9G520300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 54918326-54920325 Setaria italica
Seita.9G520300 2.0kb downstream 2.0kb downstream 3476 true scaffold_9: 54920326-54923801 Setaria italica
Seita.9G520300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 54921802-54923801 Setaria italica
Seita.9G520300 5.0kb upstream 5.0kb upstream 6476 true scaffold_9: 54915326-54921801 Setaria italica
Seita.9G520300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 54915326-54920325 Setaria italica
Seita.9G520300 5.0kb downstream 5.0kb downstream 6476 true scaffold_9: 54920326-54926801 Setaria italica
Seita.9G520300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 54921802-54926801 Setaria italica
Seita.9G520300 10.0kb upstream 10.0kb upstream 11476 true scaffold_9: 54910326-54921801 Setaria italica
Seita.9G520300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 54910326-54920325 Setaria italica
Seita.9G520300 10.0kb downstream 10.0kb downstream 11476 true scaffold_9: 54920326-54931801 Setaria italica
Seita.9G520300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 54921802-54931801 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181509 5267 Panicoideae View MSA
124584002 5269 Grass View MSA
122049393 5273 Angiosperm View MSA
121345648 5274 Embryophyte View MSA
123425550 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.778        
cufflinks 1.629        
cufflinks 4.977        
cufflinks 5.33       High
cufflinks 3.488        
cufflinks 1.808        
cufflinks 2.278        
cufflinks 3.062        
cufflinks 2.133        
cufflinks 7.058       High
cufflinks 2.491        
cufflinks 2.156        
cufflinks 1.24        
cufflinks 9.942       High
cufflinks 0.689       Low
cufflinks 2.097        
cufflinks 0.603       Low
cufflinks 2.094        
cufflinks 6.369       High
cufflinks 1.059       Low

0 Strain