Gene : Seita.9G525900 S. italica v2.2
Defline:  (1 of 1) PTHR12197:SF126 - SET DOMAIN PROTEIN 35 Genomic Order:  5259
Name:  ? Seita.9G525900 Secondary Identifier:  ? PAC:32687420
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G525900 0.5kb upstream 0.5kb upstream 2126 true scaffold_9: 55282855-55284980 Setaria italica
Seita.9G525900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 55282855-55283354 Setaria italica
Seita.9G525900 0.5kb downstream 0.5kb downstream 2126 true scaffold_9: 55283355-55285480 Setaria italica
Seita.9G525900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 55284981-55285480 Setaria italica
Seita.9G525900 1.0kb upstream 1.0kb upstream 2626 true scaffold_9: 55282355-55284980 Setaria italica
Seita.9G525900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 55282355-55283354 Setaria italica
Seita.9G525900 1.0kb downstream 1.0kb downstream 2626 true scaffold_9: 55283355-55285980 Setaria italica
Seita.9G525900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 55284981-55285980 Setaria italica
Seita.9G525900 2.0kb upstream 2.0kb upstream 3626 true scaffold_9: 55281355-55284980 Setaria italica
Seita.9G525900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 55281355-55283354 Setaria italica
Seita.9G525900 2.0kb downstream 2.0kb downstream 3626 true scaffold_9: 55283355-55286980 Setaria italica
Seita.9G525900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 55284981-55286980 Setaria italica
Seita.9G525900 5.0kb upstream 5.0kb upstream 6626 true scaffold_9: 55278355-55284980 Setaria italica
Seita.9G525900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 55278355-55283354 Setaria italica
Seita.9G525900 5.0kb downstream 5.0kb downstream 6626 true scaffold_9: 55283355-55289980 Setaria italica
Seita.9G525900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 55284981-55289980 Setaria italica
Seita.9G525900 10.0kb upstream 10.0kb upstream 11626 true scaffold_9: 55273355-55284980 Setaria italica
Seita.9G525900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 55273355-55283354 Setaria italica
Seita.9G525900 10.0kb downstream 10.0kb downstream 11626 true scaffold_9: 55283355-55294980 Setaria italica
Seita.9G525900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 55284981-55294980 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179805 5267 Panicoideae View MSA
124587476 5269 Grass View MSA
122042424 5273 Angiosperm View MSA
121344339 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.529        
cufflinks 1.235        
cufflinks 0.012     Low Low
cufflinks 0.015     Low Low
cufflinks 0.044     Low Low
cufflinks 0.966        
cufflinks 0.865        
cufflinks 1.105        
cufflinks 0.73        
cufflinks 0.886        
cufflinks 0.782        
cufflinks 0.871        
cufflinks 0.266        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.649        
cufflinks 0.146        
cufflinks 1.413        
cufflinks 0.047     Low Low
cufflinks 0.047     Low Low
cufflinks 1.866       High

0 Strain