Gene : Seita.9G531300 S. italica v2.2
Defline:  (1 of 4) KOG1757 - Histone 2A Genomic Order:  5313
Name:  ? Seita.9G531300 Secondary Identifier:  ? PAC:32692705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G531300 0.5kb upstream 0.5kb upstream 1766 true scaffold_9: 55617903-55619668 Setaria italica
Seita.9G531300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 55619169-55619668 Setaria italica
Seita.9G531300 0.5kb downstream 0.5kb downstream 1766 true scaffold_9: 55617403-55619168 Setaria italica
Seita.9G531300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 55617403-55617902 Setaria italica
Seita.9G531300 1.0kb upstream 1.0kb upstream 2266 true scaffold_9: 55617903-55620168 Setaria italica
Seita.9G531300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 55619169-55620168 Setaria italica
Seita.9G531300 1.0kb downstream 1.0kb downstream 2266 true scaffold_9: 55616903-55619168 Setaria italica
Seita.9G531300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 55616903-55617902 Setaria italica
Seita.9G531300 2.0kb upstream 2.0kb upstream 3266 true scaffold_9: 55617903-55621168 Setaria italica
Seita.9G531300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 55619169-55621168 Setaria italica
Seita.9G531300 2.0kb downstream 2.0kb downstream 3266 true scaffold_9: 55615903-55619168 Setaria italica
Seita.9G531300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 55615903-55617902 Setaria italica
Seita.9G531300 5.0kb upstream 5.0kb upstream 6266 true scaffold_9: 55617903-55624168 Setaria italica
Seita.9G531300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 55619169-55624168 Setaria italica
Seita.9G531300 5.0kb downstream 5.0kb downstream 6266 true scaffold_9: 55612903-55619168 Setaria italica
Seita.9G531300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 55612903-55617902 Setaria italica
Seita.9G531300 10.0kb upstream 10.0kb upstream 11266 true scaffold_9: 55617903-55629168 Setaria italica
Seita.9G531300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 55619169-55629168 Setaria italica
Seita.9G531300 10.0kb downstream 10.0kb downstream 11266 true scaffold_9: 55607903-55619168 Setaria italica
Seita.9G531300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 55607903-55617902 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184688 5267 Panicoideae View MSA
124583387 5269 Grass View MSA
122050961 5273 Angiosperm View MSA
121349814 5274 Embryophyte View MSA
123424347 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.238        
cufflinks 32.263     High High
cufflinks 0.934       Low
cufflinks 0.65       Low
cufflinks 0.852       Low
cufflinks 39.927     High High
cufflinks 17.619     High  
cufflinks 32.323     High High
cufflinks 17.911     High  
cufflinks 31.566     High High
cufflinks 15.299     High  
cufflinks 9.179        
cufflinks 10.749        
cufflinks 1.594       Low
cufflinks 14.953     High  
cufflinks 3.401        
cufflinks 15.627     High  
cufflinks 2.127        
cufflinks 0.488       Low
cufflinks 19.734     High  

0 Strain