Gene : Seita.9G532700 S. italica v2.2
Defline:  (1 of 1) PTHR11814:SF60 - SULFATE TRANSPORTER 3.1-RELATED Genomic Order:  5327
Name:  ? Seita.9G532700 Secondary Identifier:  ? PAC:32692925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G532700 0.5kb upstream 0.5kb upstream 6345 true scaffold_9: 55716795-55723139 Setaria italica
Seita.9G532700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 55716795-55717294 Setaria italica
Seita.9G532700 0.5kb downstream 0.5kb downstream 6345 true scaffold_9: 55717295-55723639 Setaria italica
Seita.9G532700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 55723140-55723639 Setaria italica
Seita.9G532700 1.0kb upstream 1.0kb upstream 6845 true scaffold_9: 55716295-55723139 Setaria italica
Seita.9G532700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 55716295-55717294 Setaria italica
Seita.9G532700 1.0kb downstream 1.0kb downstream 6845 true scaffold_9: 55717295-55724139 Setaria italica
Seita.9G532700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 55723140-55724139 Setaria italica
Seita.9G532700 2.0kb upstream 2.0kb upstream 7845 true scaffold_9: 55715295-55723139 Setaria italica
Seita.9G532700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 55715295-55717294 Setaria italica
Seita.9G532700 2.0kb downstream 2.0kb downstream 7845 true scaffold_9: 55717295-55725139 Setaria italica
Seita.9G532700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 55723140-55725139 Setaria italica
Seita.9G532700 5.0kb upstream 5.0kb upstream 10845 true scaffold_9: 55712295-55723139 Setaria italica
Seita.9G532700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 55712295-55717294 Setaria italica
Seita.9G532700 5.0kb downstream 5.0kb downstream 10845 true scaffold_9: 55717295-55728139 Setaria italica
Seita.9G532700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 55723140-55728139 Setaria italica
Seita.9G532700 10.0kb upstream 10.0kb upstream 15845 true scaffold_9: 55707295-55723139 Setaria italica
Seita.9G532700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 55707295-55717294 Setaria italica
Seita.9G532700 10.0kb downstream 10.0kb downstream 15845 true scaffold_9: 55717295-55733139 Setaria italica
Seita.9G532700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 55723140-55733139 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182043 5267 Panicoideae View MSA
124577807 5269 Grass View MSA
122043388 5273 Angiosperm View MSA
123429043 5275 Viridiplantae View MSA
121310116 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.912     High  
cufflinks 11.181        
cufflinks 1.94        
cufflinks 1.38        
cufflinks 3.42        
cufflinks 9.91        
cufflinks 16.872     High  
cufflinks 7.08        
cufflinks 6.827        
cufflinks 7.352        
cufflinks 24.438     High High
cufflinks 0.138       Low
cufflinks 12.999        
cufflinks 19.033     High  
cufflinks 1.625        
cufflinks 8.35        
cufflinks 0.401       Low
cufflinks 4.649        
cufflinks 18.842     High  
cufflinks 0.971       Low

0 Strain