Gene : Seita.9G536500 S. italica v2.2
Defline:  (1 of 1) PTHR13789//PTHR13789:SF206 - MONOOXYGENASE Genomic Order:  5365
Name:  ? Seita.9G536500 Secondary Identifier:  ? PAC:32692390
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G536500 0.5kb upstream 0.5kb upstream 3764 true scaffold_9: 55949693-55953456 Setaria italica
Seita.9G536500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 55952957-55953456 Setaria italica
Seita.9G536500 0.5kb downstream 0.5kb downstream 3764 true scaffold_9: 55949193-55952956 Setaria italica
Seita.9G536500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 55949193-55949692 Setaria italica
Seita.9G536500 1.0kb upstream 1.0kb upstream 4264 true scaffold_9: 55949693-55953956 Setaria italica
Seita.9G536500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 55952957-55953956 Setaria italica
Seita.9G536500 1.0kb downstream 1.0kb downstream 4264 true scaffold_9: 55948693-55952956 Setaria italica
Seita.9G536500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 55948693-55949692 Setaria italica
Seita.9G536500 2.0kb upstream 2.0kb upstream 5264 true scaffold_9: 55949693-55954956 Setaria italica
Seita.9G536500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 55952957-55954956 Setaria italica
Seita.9G536500 2.0kb downstream 2.0kb downstream 5264 true scaffold_9: 55947693-55952956 Setaria italica
Seita.9G536500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 55947693-55949692 Setaria italica
Seita.9G536500 5.0kb upstream 5.0kb upstream 8264 true scaffold_9: 55949693-55957956 Setaria italica
Seita.9G536500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 55952957-55957956 Setaria italica
Seita.9G536500 5.0kb downstream 5.0kb downstream 8264 true scaffold_9: 55944693-55952956 Setaria italica
Seita.9G536500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 55944693-55949692 Setaria italica
Seita.9G536500 10.0kb upstream 10.0kb upstream 13264 true scaffold_9: 55949693-55962956 Setaria italica
Seita.9G536500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 55952957-55962956 Setaria italica
Seita.9G536500 10.0kb downstream 10.0kb downstream 13264 true scaffold_9: 55939693-55952956 Setaria italica
Seita.9G536500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 55939693-55949692 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187299 5267 Panicoideae View MSA
124586589 5269 Grass View MSA
122051519 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349985 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.754        
cufflinks 0.975        
cufflinks 0.184        
cufflinks 0.127       Low
cufflinks 0.33        
cufflinks 1.072        
cufflinks 0.48        
cufflinks 0.486        
cufflinks 0.293        
cufflinks 1.68        
cufflinks 0.989        
cufflinks 2.457        
cufflinks 2.885        
cufflinks 7.803       High
cufflinks 3.949       High
cufflinks 0.014     Low Low
cufflinks 5.904       High
cufflinks 0.292        
cufflinks 0.561        
cufflinks 2.003        

0 Strain