Gene : Seita.9G537000 S. italica v2.2
Genomic Order:  5370 Name:  ? Seita.9G537000
Secondary Identifier:  ? PAC:32692523
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G537000 0.5kb upstream 0.5kb upstream 3651 true scaffold_9: 55985074-55988724 Setaria italica
Seita.9G537000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 55985074-55985573 Setaria italica
Seita.9G537000 0.5kb downstream 0.5kb downstream 3651 true scaffold_9: 55985574-55989224 Setaria italica
Seita.9G537000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 55988725-55989224 Setaria italica
Seita.9G537000 1.0kb upstream 1.0kb upstream 4151 true scaffold_9: 55984574-55988724 Setaria italica
Seita.9G537000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 55984574-55985573 Setaria italica
Seita.9G537000 1.0kb downstream 1.0kb downstream 4151 true scaffold_9: 55985574-55989724 Setaria italica
Seita.9G537000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 55988725-55989724 Setaria italica
Seita.9G537000 2.0kb upstream 2.0kb upstream 5151 true scaffold_9: 55983574-55988724 Setaria italica
Seita.9G537000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 55983574-55985573 Setaria italica
Seita.9G537000 2.0kb downstream 2.0kb downstream 5151 true scaffold_9: 55985574-55990724 Setaria italica
Seita.9G537000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 55988725-55990724 Setaria italica
Seita.9G537000 5.0kb upstream 5.0kb upstream 8151 true scaffold_9: 55980574-55988724 Setaria italica
Seita.9G537000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 55980574-55985573 Setaria italica
Seita.9G537000 5.0kb downstream 5.0kb downstream 8151 true scaffold_9: 55985574-55993724 Setaria italica
Seita.9G537000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 55988725-55993724 Setaria italica
Seita.9G537000 10.0kb upstream 10.0kb upstream 13151 true scaffold_9: 55975574-55988724 Setaria italica
Seita.9G537000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 55975574-55985573 Setaria italica
Seita.9G537000 10.0kb downstream 10.0kb downstream 13151 true scaffold_9: 55985574-55998724 Setaria italica
Seita.9G537000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 55988725-55998724 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180657 5267 Panicoideae View MSA
124573832 5269 Grass View MSA
122047185 5273 Angiosperm View MSA
121347839 5274 Embryophyte View MSA
123423892 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.778       Low
cufflinks 1.395        
cufflinks 5.237        
cufflinks 8.849       High
cufflinks 7.582       High
cufflinks 1.088        
cufflinks 5.136        
cufflinks 7.757       High
cufflinks 2.086        
cufflinks 1.226        
cufflinks 0.915       Low
cufflinks 1.1        
cufflinks 1.087        
cufflinks 4.197        
cufflinks 1.321        
cufflinks 7.808       High
cufflinks 1.139        
cufflinks 2.039        
cufflinks 7.951       High
cufflinks 1.148        

0 Strain