Gene : Seita.9G480800 S. italica v2.2
Genomic Order:  4808 Name:  ? Seita.9G480800
Secondary Identifier:  ? PAC:32691224
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G480800 0.5kb upstream 0.5kb upstream 3664 true scaffold_9: 52047062-52050725 Setaria italica
Seita.9G480800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 52047062-52047561 Setaria italica
Seita.9G480800 0.5kb downstream 0.5kb downstream 3664 true scaffold_9: 52047562-52051225 Setaria italica
Seita.9G480800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 52050726-52051225 Setaria italica
Seita.9G480800 1.0kb upstream 1.0kb upstream 4164 true scaffold_9: 52046562-52050725 Setaria italica
Seita.9G480800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 52046562-52047561 Setaria italica
Seita.9G480800 1.0kb downstream 1.0kb downstream 4164 true scaffold_9: 52047562-52051725 Setaria italica
Seita.9G480800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 52050726-52051725 Setaria italica
Seita.9G480800 2.0kb upstream 2.0kb upstream 5164 true scaffold_9: 52045562-52050725 Setaria italica
Seita.9G480800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 52045562-52047561 Setaria italica
Seita.9G480800 2.0kb downstream 2.0kb downstream 5164 true scaffold_9: 52047562-52052725 Setaria italica
Seita.9G480800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 52050726-52052725 Setaria italica
Seita.9G480800 5.0kb upstream 5.0kb upstream 8164 true scaffold_9: 52042562-52050725 Setaria italica
Seita.9G480800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 52042562-52047561 Setaria italica
Seita.9G480800 5.0kb downstream 5.0kb downstream 8164 true scaffold_9: 52047562-52055725 Setaria italica
Seita.9G480800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 52050726-52055725 Setaria italica
Seita.9G480800 10.0kb upstream 10.0kb upstream 13164 true scaffold_9: 52037562-52050725 Setaria italica
Seita.9G480800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 52037562-52047561 Setaria italica
Seita.9G480800 10.0kb downstream 10.0kb downstream 13164 true scaffold_9: 52047562-52060725 Setaria italica
Seita.9G480800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 52050726-52060725 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199841 5267 Panicoideae View MSA
124591138 5269 Grass View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.24     High High
cufflinks 14.76     High  
cufflinks 12.189     High  
cufflinks 7.972        
cufflinks 6.977       Low
cufflinks 15.491     High  
cufflinks 10.41        
cufflinks 15.528     High  
cufflinks 10.512        
cufflinks 4.37       Low
cufflinks 12.189        
cufflinks 12.35        
cufflinks 5.999       Low
cufflinks 9.654        
cufflinks 12.31        
cufflinks 15.559     High  
cufflinks 12.382        
cufflinks 14.914     High  
cufflinks 6.97       Low
cufflinks 10.887        

0 Strain