Gene : Seita.9G481100 S. italica v2.2
Defline:  (1 of 2) PTHR11746:SF89 - MAF-LIKE PROTEIN Genomic Order:  4811
Name:  ? Seita.9G481100 Secondary Identifier:  ? PAC:32689718
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G481100 0.5kb upstream 0.5kb upstream 4081 true scaffold_9: 52103388-52107468 Setaria italica
Seita.9G481100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 52106969-52107468 Setaria italica
Seita.9G481100 0.5kb downstream 0.5kb downstream 4081 true scaffold_9: 52102888-52106968 Setaria italica
Seita.9G481100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 52102888-52103387 Setaria italica
Seita.9G481100 1.0kb upstream 1.0kb upstream 4581 true scaffold_9: 52103388-52107968 Setaria italica
Seita.9G481100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 52106969-52107968 Setaria italica
Seita.9G481100 1.0kb downstream 1.0kb downstream 4581 true scaffold_9: 52102388-52106968 Setaria italica
Seita.9G481100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 52102388-52103387 Setaria italica
Seita.9G481100 2.0kb upstream 2.0kb upstream 5581 true scaffold_9: 52103388-52108968 Setaria italica
Seita.9G481100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 52106969-52108968 Setaria italica
Seita.9G481100 2.0kb downstream 2.0kb downstream 5581 true scaffold_9: 52101388-52106968 Setaria italica
Seita.9G481100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 52101388-52103387 Setaria italica
Seita.9G481100 5.0kb upstream 5.0kb upstream 8581 true scaffold_9: 52103388-52111968 Setaria italica
Seita.9G481100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 52106969-52111968 Setaria italica
Seita.9G481100 5.0kb downstream 5.0kb downstream 8581 true scaffold_9: 52098388-52106968 Setaria italica
Seita.9G481100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 52098388-52103387 Setaria italica
Seita.9G481100 10.0kb upstream 10.0kb upstream 13581 true scaffold_9: 52103388-52116968 Setaria italica
Seita.9G481100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 52106969-52116968 Setaria italica
Seita.9G481100 10.0kb downstream 10.0kb downstream 13581 true scaffold_9: 52093388-52106968 Setaria italica
Seita.9G481100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 52093388-52103387 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185020 5267 Panicoideae View MSA
124574678 5269 Grass View MSA
122045669 5273 Angiosperm View MSA
121347130 5274 Embryophyte View MSA
123427064 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.221        
cufflinks 3.606        
cufflinks 4.271        
cufflinks 4.102        
cufflinks 2.984       Low
cufflinks 4.591        
cufflinks 3.81        
cufflinks 5.871       High
cufflinks 3.925        
cufflinks 4.243        
cufflinks 2.912       Low
cufflinks 4.829       High
cufflinks 3.421        
cufflinks 4.985       High
cufflinks 3.587        
cufflinks 3.966        
cufflinks 5.171       High
cufflinks 3.495        
cufflinks 3.534        
cufflinks 4.261        

0 Strain