Gene : Seita.9G482500 S. italica v2.2
Defline:  (1 of 1) PTHR32467:SF11 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT Genomic Order:  4825
Name:  ? Seita.9G482500 Secondary Identifier:  ? PAC:32693524
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G482500 0.5kb upstream 0.5kb upstream 4696 true scaffold_9: 52265253-52269948 Setaria italica
Seita.9G482500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 52269449-52269948 Setaria italica
Seita.9G482500 0.5kb downstream 0.5kb downstream 4696 true scaffold_9: 52264753-52269448 Setaria italica
Seita.9G482500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 52264753-52265252 Setaria italica
Seita.9G482500 1.0kb upstream 1.0kb upstream 5196 true scaffold_9: 52265253-52270448 Setaria italica
Seita.9G482500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 52269449-52270448 Setaria italica
Seita.9G482500 1.0kb downstream 1.0kb downstream 5196 true scaffold_9: 52264253-52269448 Setaria italica
Seita.9G482500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 52264253-52265252 Setaria italica
Seita.9G482500 2.0kb upstream 2.0kb upstream 6196 true scaffold_9: 52265253-52271448 Setaria italica
Seita.9G482500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 52269449-52271448 Setaria italica
Seita.9G482500 2.0kb downstream 2.0kb downstream 6196 true scaffold_9: 52263253-52269448 Setaria italica
Seita.9G482500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 52263253-52265252 Setaria italica
Seita.9G482500 5.0kb upstream 5.0kb upstream 9196 true scaffold_9: 52265253-52274448 Setaria italica
Seita.9G482500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 52269449-52274448 Setaria italica
Seita.9G482500 5.0kb downstream 5.0kb downstream 9196 true scaffold_9: 52260253-52269448 Setaria italica
Seita.9G482500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 52260253-52265252 Setaria italica
Seita.9G482500 10.0kb upstream 10.0kb upstream 14196 true scaffold_9: 52265253-52279448 Setaria italica
Seita.9G482500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 52269449-52279448 Setaria italica
Seita.9G482500 10.0kb downstream 10.0kb downstream 14196 true scaffold_9: 52255253-52269448 Setaria italica
Seita.9G482500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 52255253-52265252 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178286 5267 Panicoideae View MSA
124582200 5269 Grass View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.193        
cufflinks 1.711        
cufflinks 0.027     Low Low
cufflinks 0.031     Low Low
cufflinks 0.043     Low Low
cufflinks 2.447       High
cufflinks 1.164        
cufflinks 1.674        
cufflinks 0.531        
cufflinks 1.032        
cufflinks 1.032        
cufflinks 0.162        
cufflinks 0.385        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.459        
cufflinks 1.397        
cufflinks 0.353        
cufflinks 1.434        
cufflinks 0.014     Low Low
cufflinks 0.314        

0 Strain