Gene : Seita.9G506300 S. italica v2.2
Defline:  (1 of 1) PTHR11814//PTHR11814:SF127 - SULFATE TRANSPORTER Genomic Order:  5063
Name:  ? Seita.9G506300 Secondary Identifier:  ? PAC:32688039
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G506300 0.5kb upstream 0.5kb upstream 4488 true scaffold_9: 53998497-54002984 Setaria italica
Seita.9G506300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 53998497-53998996 Setaria italica
Seita.9G506300 0.5kb downstream 0.5kb downstream 4488 true scaffold_9: 53998997-54003484 Setaria italica
Seita.9G506300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 54002985-54003484 Setaria italica
Seita.9G506300 1.0kb upstream 1.0kb upstream 4988 true scaffold_9: 53997997-54002984 Setaria italica
Seita.9G506300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 53997997-53998996 Setaria italica
Seita.9G506300 1.0kb downstream 1.0kb downstream 4988 true scaffold_9: 53998997-54003984 Setaria italica
Seita.9G506300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 54002985-54003984 Setaria italica
Seita.9G506300 2.0kb upstream 2.0kb upstream 5988 true scaffold_9: 53996997-54002984 Setaria italica
Seita.9G506300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 53996997-53998996 Setaria italica
Seita.9G506300 2.0kb downstream 2.0kb downstream 5988 true scaffold_9: 53998997-54004984 Setaria italica
Seita.9G506300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 54002985-54004984 Setaria italica
Seita.9G506300 5.0kb upstream 5.0kb upstream 8988 true scaffold_9: 53993997-54002984 Setaria italica
Seita.9G506300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 53993997-53998996 Setaria italica
Seita.9G506300 5.0kb downstream 5.0kb downstream 8988 true scaffold_9: 53998997-54007984 Setaria italica
Seita.9G506300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 54002985-54007984 Setaria italica
Seita.9G506300 10.0kb upstream 10.0kb upstream 13988 true scaffold_9: 53988997-54002984 Setaria italica
Seita.9G506300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 53988997-53998996 Setaria italica
Seita.9G506300 10.0kb downstream 10.0kb downstream 13988 true scaffold_9: 53998997-54012984 Setaria italica
Seita.9G506300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 54002985-54012984 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178895 5267 Panicoideae View MSA
124585174 5269 Grass View MSA
122046065 5273 Angiosperm View MSA
121310548 5274 Embryophyte View MSA
123348002 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low Low
cufflinks 0.008     Low Low
cufflinks 0.205        
cufflinks 0.407        
cufflinks 0.385        
cufflinks 0.014     Low  
cufflinks 1.592       High
cufflinks 1.612       High
cufflinks 0.482       High
cufflinks 0.038     Low  
cufflinks 0.022     Low  
cufflinks 0.066     Low  
cufflinks 0.046     Low  
cufflinks 0.053     Low  
cufflinks 0.059     Low  
cufflinks 0.148        
cufflinks 0.049     Low  
cufflinks 0.02     Low  
cufflinks 0.24        
cufflinks 0.013     Low  

0 Strain