Gene : Seita.9G510500 S. italica v2.2
Defline:  (1 of 2) PTHR24073:SF350 - RAS-RELATED PROTEIN RABA4C Genomic Order:  5105
Name:  ? Seita.9G510500 Secondary Identifier:  ? PAC:32692126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G510500 0.5kb upstream 0.5kb upstream 2897 true scaffold_9: 54273372-54276268 Setaria italica
Seita.9G510500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 54273372-54273871 Setaria italica
Seita.9G510500 0.5kb downstream 0.5kb downstream 2897 true scaffold_9: 54273872-54276768 Setaria italica
Seita.9G510500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 54276269-54276768 Setaria italica
Seita.9G510500 1.0kb upstream 1.0kb upstream 3397 true scaffold_9: 54272872-54276268 Setaria italica
Seita.9G510500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 54272872-54273871 Setaria italica
Seita.9G510500 1.0kb downstream 1.0kb downstream 3397 true scaffold_9: 54273872-54277268 Setaria italica
Seita.9G510500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 54276269-54277268 Setaria italica
Seita.9G510500 2.0kb upstream 2.0kb upstream 4397 true scaffold_9: 54271872-54276268 Setaria italica
Seita.9G510500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 54271872-54273871 Setaria italica
Seita.9G510500 2.0kb downstream 2.0kb downstream 4397 true scaffold_9: 54273872-54278268 Setaria italica
Seita.9G510500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 54276269-54278268 Setaria italica
Seita.9G510500 5.0kb upstream 5.0kb upstream 7397 true scaffold_9: 54268872-54276268 Setaria italica
Seita.9G510500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 54268872-54273871 Setaria italica
Seita.9G510500 5.0kb downstream 5.0kb downstream 7397 true scaffold_9: 54273872-54281268 Setaria italica
Seita.9G510500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 54276269-54281268 Setaria italica
Seita.9G510500 10.0kb upstream 10.0kb upstream 12397 true scaffold_9: 54263872-54276268 Setaria italica
Seita.9G510500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 54263872-54273871 Setaria italica
Seita.9G510500 10.0kb downstream 10.0kb downstream 12397 true scaffold_9: 54273872-54286268 Setaria italica
Seita.9G510500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 54276269-54286268 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179287 5267 Panicoideae View MSA
124588863 5269 Grass View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.917        
cufflinks 21.686     High High
cufflinks 0.234       Low
cufflinks 0.279       Low
cufflinks 0.434       Low
cufflinks 18.837     High  
cufflinks 7.189        
cufflinks 10.718        
cufflinks 7.229        
cufflinks 12.196        
cufflinks 13.957     High  
cufflinks 7.647        
cufflinks 18.172     High  
cufflinks 0.576       Low
cufflinks 14.843     High  
cufflinks 0.885        
cufflinks 11.443        
cufflinks 0.37       Low
cufflinks 0.387       Low
cufflinks 15.543     High  

0 Strain