Gene : Seita.9G516200 S. italica v2.2
Defline:  (1 of 52) 2.7.10.2 - Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase Genomic Order:  5162
Name:  ? Seita.9G516200 Secondary Identifier:  ? PAC:32686653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G516200 0.5kb upstream 0.5kb upstream 6744 true scaffold_9: 54659520-54666263 Setaria italica
Seita.9G516200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 54665764-54666263 Setaria italica
Seita.9G516200 0.5kb downstream 0.5kb downstream 6744 true scaffold_9: 54659020-54665763 Setaria italica
Seita.9G516200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 54659020-54659519 Setaria italica
Seita.9G516200 1.0kb upstream 1.0kb upstream 7244 true scaffold_9: 54659520-54666763 Setaria italica
Seita.9G516200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 54665764-54666763 Setaria italica
Seita.9G516200 1.0kb downstream 1.0kb downstream 7244 true scaffold_9: 54658520-54665763 Setaria italica
Seita.9G516200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 54658520-54659519 Setaria italica
Seita.9G516200 2.0kb upstream 2.0kb upstream 8244 true scaffold_9: 54659520-54667763 Setaria italica
Seita.9G516200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 54665764-54667763 Setaria italica
Seita.9G516200 2.0kb downstream 2.0kb downstream 8244 true scaffold_9: 54657520-54665763 Setaria italica
Seita.9G516200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 54657520-54659519 Setaria italica
Seita.9G516200 5.0kb upstream 5.0kb upstream 11244 true scaffold_9: 54659520-54670763 Setaria italica
Seita.9G516200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 54665764-54670763 Setaria italica
Seita.9G516200 5.0kb downstream 5.0kb downstream 11244 true scaffold_9: 54654520-54665763 Setaria italica
Seita.9G516200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 54654520-54659519 Setaria italica
Seita.9G516200 10.0kb upstream 10.0kb upstream 16244 true scaffold_9: 54659520-54675763 Setaria italica
Seita.9G516200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 54665764-54675763 Setaria italica
Seita.9G516200 10.0kb downstream 10.0kb downstream 16244 true scaffold_9: 54649520-54665763 Setaria italica
Seita.9G516200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 54649520-54659519 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176067 5267 Panicoideae View MSA
124576318 5269 Grass View MSA
122050311 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.475     High  
cufflinks 26.064     High  
cufflinks 9.095       Low
cufflinks 12.979     High Low
cufflinks 28.36     High  
cufflinks 22.993     High  
cufflinks 25.283     High  
cufflinks 18.668     High  
cufflinks 47.417     High High
cufflinks 16.598     High  
cufflinks 23.861     High  
cufflinks 20.323     High  
cufflinks 24.961     High  
cufflinks 19.778     High  
cufflinks 27.042     High  
cufflinks 12.644     High Low
cufflinks 23.252     High  
cufflinks 11.767     High Low
cufflinks 19.873     High  
cufflinks 33.529     High High

0 Strain