Gene : Seita.9G515500 S. italica v2.2
Defline:  (1 of 1) PTHR11183:SF44 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 Genomic Order:  5155
Name:  ? Seita.9G515500 Secondary Identifier:  ? PAC:32687126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G515500 0.5kb upstream 0.5kb upstream 4503 true scaffold_9: 54619474-54623976 Setaria italica
Seita.9G515500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 54623477-54623976 Setaria italica
Seita.9G515500 0.5kb downstream 0.5kb downstream 4503 true scaffold_9: 54618974-54623476 Setaria italica
Seita.9G515500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 54618974-54619473 Setaria italica
Seita.9G515500 1.0kb upstream 1.0kb upstream 5003 true scaffold_9: 54619474-54624476 Setaria italica
Seita.9G515500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 54623477-54624476 Setaria italica
Seita.9G515500 1.0kb downstream 1.0kb downstream 5003 true scaffold_9: 54618474-54623476 Setaria italica
Seita.9G515500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 54618474-54619473 Setaria italica
Seita.9G515500 2.0kb upstream 2.0kb upstream 6003 true scaffold_9: 54619474-54625476 Setaria italica
Seita.9G515500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 54623477-54625476 Setaria italica
Seita.9G515500 2.0kb downstream 2.0kb downstream 6003 true scaffold_9: 54617474-54623476 Setaria italica
Seita.9G515500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 54617474-54619473 Setaria italica
Seita.9G515500 5.0kb upstream 5.0kb upstream 9003 true scaffold_9: 54619474-54628476 Setaria italica
Seita.9G515500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 54623477-54628476 Setaria italica
Seita.9G515500 5.0kb downstream 5.0kb downstream 9003 true scaffold_9: 54614474-54623476 Setaria italica
Seita.9G515500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 54614474-54619473 Setaria italica
Seita.9G515500 10.0kb upstream 10.0kb upstream 14003 true scaffold_9: 54619474-54633476 Setaria italica
Seita.9G515500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 54623477-54633476 Setaria italica
Seita.9G515500 10.0kb downstream 10.0kb downstream 14003 true scaffold_9: 54609474-54623476 Setaria italica
Seita.9G515500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 54609474-54619473 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188174 5267 Panicoideae View MSA
124568280 5269 Grass View MSA
122049566 5273 Angiosperm View MSA
121311478 5274 Embryophyte View MSA
123348771 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.346        
cufflinks 0.763        
cufflinks 0.046     Low Low
cufflinks 0.021     Low Low
cufflinks 0.875        
cufflinks 1.186        
cufflinks 2.379       High
cufflinks 1.818        
cufflinks 2.418       High
cufflinks 0.846        
cufflinks 0.785        
cufflinks 0.542        
cufflinks 5.218       High
cufflinks 0.221        
cufflinks 1.085        
cufflinks 0.327        
cufflinks 0.88        
cufflinks 0.095       Low
cufflinks 0.14        
cufflinks 1.445        

0 Strain